Vitis riparia (riverbank grape): 117906121
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Entry
117906121 CDS
T07274
Name
(RefSeq) tRNA modification GTPase MnmE isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117906121
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
117906121
Prokaryotic type
Methyltransferases
117906121
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Ortholog
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GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Ras
Roc
GTP_EFTU
RsgA_GTPase
Dynamin_N
AIG1
MMR_HSR1_Xtn
G-alpha
Motif
Other DBs
NCBI-GeneID:
117906121
NCBI-ProteinID:
XP_034674970
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All DBs
Position
18:4162520..4174985
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AA seq
597 aa
AA seq
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MGHLPAIRHLISHLHMSPRLSSSSPTTRSSLQPLFSIPTFQKLYSLFPPSLKPYHTHSKT
LVPHLHLTPNDTTLVLKKDERLGSRSVNQEHIEGTSTTTIAAIVTSLGGPPSAVGIVRLS
GPEAVAIVARVFRPARRNKGKTLGSGSGSWRPTSHVVEYGVVLDHHGNVADEVLAIPMLA
PRSYTREDVVELQCHGSEVCLRRVLRACLESGARLAEPGEFTLRAFLNGRLDLSQAENVG
KLISAKSIAAADAALAGIQGGFSSLVRSLRIQCIELLTEIEARLDFDDEMPPLDLNLIMD
KIHSMSQDVENALETANYDQLLQSGLQIAIIGRPNVGKSSLLNAWSKSERAIVTEVAGTT
RDVVEASVSIHGIPVTLLDTAGIRETDDIVEKIGVERSEAVAISADVIIMTISALEGWTS
QDTKLFNRIISNKKFVESSTPVILVVNKIDCAPSACTELFMKGNSFSKHIFTCAVTGQGI
SDLESAIIEIVGLNKIPAGGHRWTVNQRQCEQLVRTKEALARLISSIEEEMPLDFWTIDL
REAALALGQISGEDISEEVLTNIFGKFCIGVEMVLTRRFECQLEVSYIDSVGTPPTE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcttccagcgatccggcatctcatcagtcatctccacatgtctccaaggctc
tcctcatcatcaccaaccacaagatcctctttacaaccgctcttttccatccctactttt
caaaaactatattccctcttccctccctctcttaaaccctaccacactcactccaaaacc
ctagtaccccatctccacctcacccccaatgatactacgctggttctgaagaaagatgag
cggttggggtcgcgttccgttaatcaggagcatattgagggcactagcacgaccacaatt
gcagccattgtgacttcattggggggtcctcctagtgccgtgggaattgtccggttatcg
ggaccagaagcagtggccatcgttgcccgtgtattccgtcccgctcggaggaacaaaggc
aagactttgggttcgggttcgggttcgtggcggcccaccagtcatgtggtggagtacggt
gtcgttttggaccaccacgggaatgtggcggacgaggttctagccataccaatgttggcc
ccaagatcctacactcgtgaagatgtggttgagcttcagtgtcatggcagtgaagtgtgt
ttacgccgtgtgttgagagcttgcttggaatctggggcaaggcttgcagaaccaggcgag
ttcacccttcgtgcttttcttaatggtcgattagatctctcccaagctgaaaatgtggga
aaactaatttcagccaagtccattgctgctgcagatgcagcacttgcaggaattcaggga
ggtttctcatctttggttagatcacttagaatacagtgcatcgagttgcttactgaaatt
gaagctcgattagattttgatgacgagatgccaccattggacttgaatctcattatggat
aaaatacattccatgtcacaagatgtggagaatgcattggagactgccaattatgaccag
ctactgcaatctggactacagatagcaattattggacgtccaaatgttgggaagtccagc
cttcttaatgcatggagcaaaagtgagagagcaatagttacagaggtagctggaaccaca
cgggatgtggtggaagccagtgtttccattcatggcatccctgtcaccctccttgataca
gcaggtattagggaaacagatgacattgtggagaagattggtgtagagagatccgaagca
gttgctatcagtgcagatgtcattatcatgacaataagtgcattagaagggtggacatca
caagataccaaactttttaacaggattatatccaataagaaatttgttgaatcttctact
ccagtgatccttgtagtcaacaaaatagattgtgctccatctgcatgcaccgaattgttt
atgaagggaaactctttcagtaagcacattttcacttgtgcagtcaccggccaaggaata
tcagacttggagtcagcaataatagagattgttggtctcaacaagattcctgcagggggg
cacagatggactgtaaaccagagacaatgtgaacaacttgttcggaccaaggaggctctt
gcaaggttgatatcctctatagaggaggaaatgcctcttgacttctggacaattgatttg
agggaagccgcattggcccttggccagataagtggagaagatatctctgaagaagttttg
accaacatctttggcaagttctgtattggagtggaaatggtactgactagaagatttgag
tgccagttagaggtgagttacatagattcagttggtaccccacccactgaatga
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