Vitis riparia (riverbank grape): 117913016
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Entry
117913016 CDS
T07274
Name
(RefSeq) chaperone protein ClpB4, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vri03110
]
117913016
Chaperones and folding catalysts [BR:
vri03110
]
Heat shock proteins
HSP100
117913016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
Zeta_toxin
Mg_chelatase
AAA_28
TniB
AAA_18
AAA_7
AAA_24
ABC_tran
NACHT
ResIII
NBD_SMAX1
PduV-EutP
DUF1359
Motif
Other DBs
NCBI-GeneID:
117913016
NCBI-ProteinID:
XP_034683754
LinkDB
All DBs
Position
4:5733276..5748066
Genome browser
AA seq
962 aa
AA seq
DB search
MASRAFRLTRSLHRYRSVLGRACELSAPAAVGRSVCVPLIRVVGGGAENPVFVKSVNNLV
GNGFGRRFYSSYDNANQINQSEFTEMAWEGMVDAVDAARLSKQQIVESEHLMKALLEQKD
GLARRIFTKAGLDNTSVLQATDDFIDQQPKVVGDTSGPILGTNLRSLLEKARRHKKEMGD
NFLSVEHLLLGFLSDARFGRQLFQNLQLSEKDLKDAVSAVRGNQRVTDQNPEGKYQALEK
YGNDLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRI
VRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVLKEVTASNGQIILFIDEIHTV
VGAGAVSGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALERRFQQVFCGQPSV
EDAISILRGLRERYELHHGVKISDSALVSAAVLADRYITERFLPDKAIDLVDEAAAKLKI
EITSKPTELDEIDRAVIKLEMEKLSLKSDTDKASRERLSKLENDLLSLKQKQKDLTDQWE
QEKVLMTRIRSIKEEIDRVNLEMESAEREYNLNRAAELKYGTLISLQRQLEEAEKNLANY
RKSGKSLLREEVTDLDIAEIVSKWTGIPLSNLQQSERDKLVLLEQVLHQRVVGQENAVKS
VADAIRRSRAGLSDPIRPIASFMFMGPTGVGKTELAKALAGYLFNTENALVRIDMTEYME
KHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHDVFNILLQLLDDGRI
TDSQGRTVSFTNCVVIMTSNIGSHYILETLQSTDKKEAVYEIMKKQVVELARQTFRPEFM
NRIDEYIVFQPLDSKEISKIVEIQMNRLRERLKQKKIDLHYTKEAVELLGTQGFDPNFGA
RPVKRVIQQMVENEIAMGILRGDFKEDESIIIDADMSANIPPHKRLLIKKLESSSPMDAM
VA
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagagccttccggctcaccaggtctctccataggtaccgctccgtactcgga
cgggcctgtgaactctccgctccggctgcggtcggacggtccgtctgtgtccctttgatt
cgagttgtaggcggaggcgcagagaatcctgtgtttgtgaagtcggtgaacaatctcgtt
ggtaatgggttcggtcgcaggttttattcgtcctatgataacgctaatcagattaatcag
tcagagttcactgagatggcatgggaaggaatggttgatgctgttgatgcggcacgactt
agtaaacaacaaattgttgaatctgagcatttaatgaaagctcttttggagcagaaggat
ggcttggctcggagaatatttacaaaggctgggcttgacaatacatcagttttgcaggct
acagatgactttatagatcaacaacccaaggtggtaggtgatactagtggccctatattg
ggtacaaatctcaggtccctattggaaaaggcaagaagacacaagaaagaaatgggagat
aacttcttgtctgtagagcacctgttgttgggattcctttcagatgcaaggtttgggcgg
caactatttcagaacctccagctcagtgaaaaagatttgaaagatgctgtctcagcagtt
cgtggaaatcagagagttactgatcaaaaccctgaaggaaaataccaagcactggaaaaa
tatgggaatgacttgactgaacttgctagacgtggaaaactagatcctgtaataggacga
gatgatgaaattcggcgttgtatccagatattatctaggagaacaaagaacaaccctgtc
attattggtgagcctggtgttggaaagactgcaattgctgaaggcttagctcaaagaatt
gtgcgtggggatgttcctgaacctttgatgaacagaaagttgatttcactggatatgggt
tcattgcttgctggtgctaagttccgtggagattttgaggaaagactgaaagcagtcctt
aaggaagtcaccgcttcaaatgggcagattattttatttattgatgagatccatactgta
gtgggtgcaggggctgtgagtggggcaatggatgctgggaacttgttgaagccaatgctt
ggcagaggtgagctccgatgtataggggcaacaacattgaatgaatacagaaaatacatt
gagaaggatcctgcccttgagcgcaggttccagcaagtgttctgtggtcagccttcagtt
gaagacgcaatttccattcttcgtggattgcgtgaacgctatgagcttcatcatggtgtc
aaaatatcagacagtgcccttgtatcagcagcagttcttgcagaccgatatattacagag
cgttttttgcctgacaaagccattgatcttgtggatgaagcggctgcaaagctgaaaata
gagataacttcaaagcctacggagttggatgagatagatagagctgtgattaaactagag
atggagaaactatccctgaaaagtgacactgataaagcatccagagaaaggttaagcaag
ctggaaaatgatctactttcacttaagcagaaacagaaagatctaactgatcaatgggaa
caagaaaaggtgctcatgacacggatccgatctattaaggaggagattgacagggtcaac
ctggagatggaatctgctgaacgtgaatataatttaaatcgtgctgctgagctcaaatat
ggaaccttaatttctcttcagcggcaactggaagaggctgagaagaaccttgctaattat
cggaaatctggaaagtctttgctccgggaagaagtgactgaccttgatattgctgaaatt
gtgagtaaatggaccggtatacccttgtcaaacctacagcaatcagagagggacaagtta
gtcttgctagaacaagttctgcaccaaagggtggttggtcaggaaaatgctgttaaatca
gtggctgatgcaatccggcgttcaagggcaggattgtcagaccccatccggccaattgca
agcttcatgttcatgggtcctactggggtcggtaaaactgagcttgcaaaggctctcgca
gggtacctttttaatacagaaaatgctcttgttagaattgacatgactgaatacatggaa
aagcacgcagtctcacgcttggttggtgcaccacctggttatgtcggatatgaagaaggt
ggacagctcaccgaagtagttcgccggagaccttattccgtggtactatttgatgagatt
gagaaggcacatcacgatgtgttcaacattctgttacagctactggatgatggcaggata
actgattctcagggaagaacagttagttttacaaattgtgtagtgatcatgacatcaaat
atcgggtcccactatatcctagaaacacttcagagcacagataagaaggaagcagtttat
gagatcatgaaaaaacaagttgttgagttggccagacaaacattccgaccagagttcatg
aatcgaatcgatgaatatattgtcttccagcctttggactccaaagaaatcagcaaaatt
gttgagatacagatgaaccgactaagagagaggctgaaacagaagaaaatcgatctccat
tacacaaaggaggctgttgaacttttggggacgcaaggctttgacccaaatttcggagca
aggccagtcaagagggtaatacagcagatggttgaaaacgaaatagcaatgggaattctg
agaggggatttcaaggaggacgagtcgattatcatcgatgctgacatgtcagccaacatt
cctccccataagagattgctgatcaagaagttggagagtagttctcccatggacgccatg
gttgcctga
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