Vitis riparia (riverbank grape): 117914287
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Entry
117914287 CDS
T07274
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117914287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117914287
Membrane trafficking [BR:
vri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117914287
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
zf-Sec23_Sec24
Vps36-NZF-N
zf-UBR
WHD_CvfB
Motif
Other DBs
NCBI-GeneID:
117914287
NCBI-ProteinID:
XP_034685440
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Position
5:17732258..17741041
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AA seq
410 aa
AA seq
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MSEMGADQEGIDGVRMTWNVWPRTKVEASKCVIPIAASVSPIRSHPDIPTLPYAPLRCKT
CISLLNPFCRVDFAAKIWICPFCFQRNHFPHHYSMISESNLPGELYPQYTTVEYSLSNPG
AVPDVAAPQSIPPVFLFVLDTCMIEEELGFVKSALKRAIGLLPENALVGFVSFGTQVQVH
ELGFSEISKVYVFRGSKEISKDQVLEQLGLGGAGRRAVGGYPKGVQNGYASSGVTRFLLP
ASDCEYTLNSLLDELQTDQWAVQPGHRALRCTGVALSVAAGLLGACLPGTGARIIALVGG
PCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYFKKAVQFYENIAKQMVSQGHVLDLFASAL
DQVGVAEMKVVVERTGGLVVLAESFGHSVFKDSFKRIFEEGEQSLGLSFK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatgggcgcagatcaggagggcatcgatggagttcggatgacctggaacgtc
tggcccaggaccaaggtggaggccagcaagtgcgtgatcccaatcgctgcttcggtttct
ccgatccgatcacatcctgacatccccacgctcccctacgcgccgcttcgttgcaagacc
tgcatatcccttctcaaccccttctgccgcgtagacttcgccgccaagatctggatctgc
ccattttgcttccagcgcaaccacttcccacaccactactccatgatctccgaatccaac
ctccccggcgagctctacccgcaatacacgaccgttgagtactctctttctaaccctggg
gcggttcccgatgtcgccgcgcctcagtccattccgccggtgtttctttttgtgcttgat
acgtgtatgattgaggaggagttggggtttgtgaaatcggcgcttaagagggcgatcgga
ttgctgccggagaatgcgctggtggggtttgtgtcgtttggaacgcaggtgcaggttcac
gagttggggttttcggagatctcgaaagtgtacgtgtttcgtggctccaaggagatttcc
aaggaccaggttttggagcaattggggctcggcggcgccgggcggagggcggtcggtggg
tacccgaagggggtgcagaatgggtatgcgagttcgggggttacgcggtttttactgccg
gcgtcggactgcgagtatactcttaattcgttgttggatgaattgcaaacggatcagtgg
gcggtgcaaccaggccatagggcgttgcggtgcaccggagtggcgctgagtgttgcggca
ggtttgcttggcgcttgtttgcctggcactggtgcaaggattatagctttagttgggggt
ccttgcacagaaggcccgggaacgattgtatcaaaagatttatcagatccggtacgttct
cataaagatcttgataaggatgcagcaccatattttaagaaagcagtccaattttatgaa
aatattgcaaagcaaatggttagccaaggtcacgtcttggacctttttgcttctgctctt
gatcaggttggggttgcagagatgaaagttgtggttgaaagaacaggtggtcttgttgtt
ctggctgaaagttttggtcattccgtatttaaagactctttcaagcgcatttttgaagaa
ggggaacagtctcttggcctctcttttaagtga
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