Vitis riparia (riverbank grape): 117917567
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Entry
117917567 CDS
T07274
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117917567
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117917567
BRITE hierarchy
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
117917567
NCBI-ProteinID:
XP_034689777
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Position
1:complement(19493690..19502126)
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AA seq
1125 aa
AA seq
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MTEKPPLKYLSPQDWELLIEDFQYDVVRREKWTSHYSPLSILDLALSSILRKDFPLKLSL
ISFLEEFSDSLFRNFEVQLALDRLIDAVRSVVQAPHDAVSFSSALKERMVVAVTSILICI
GNDVEVCLGQLESLVELLLTIVNRPSHGADRQMRAVACECLRELERAFPCLLAEIAGHIW
GLCQSERTHASQSYILLFTLVIHNIVSRKVNVSILNTSVPLVPFNVPQFVVGGSSREVSG
LNFKELRRVMAFLLESPQILTPSAMMEFMSLVMPVALVLELQASMLKVQFSGLLYSYDPM
LCHVVLMIYSRFVDAFDGQEASIARRLVLISREAQLPLVFRLLALHWLLGFIGLVPDSGG
RKKQSIVEIGLGFFYPSVFDPLALKSLKLDLLAFCAICLNTLSADNMGGGSSEVAGPRVS
VVKLFEDGLVSVSAFKWLPPWSTETAVAFRTFHKFLIGARSHSDTDSSTNRTLMESTIFH
TLERLLVEMTLEFQRLVPVIVAFVDRLLLCHKHRWLGERLLQTFDQHLLPKATIDYRLAS
YFPIFDRIAENDTVPACGLLELLTKFIVSLVEKHGPDTGLKSWSLGSKVLGICRTLMIHH
HSSRLFLGLSRLLAFTCLYFPDLEVRDNARIYLRMLICIPGKKLRHILNLGAQVPGIAPS
PHTSSFFNVQSPRPSRDLKKSRNISSYIHLERVIPLLVKQSWSLSLPTLGIGGDKPGYLE
NIMDSEPPVAMEREVDGSSSIQIISETEKIDHPQEPLRVMDSKISEILGILRRHFSCIPD
FRHMPGLKIRISCSLRFKSEPFNRVWGADVPAADLDGVDALPAIYATVLTFSSSAPYGSI
PSFHIPFLLGEPPTNGYSSGQKGSLDIVPVENGSEEEVSFRAPVMIELEPREPMPGLVDV
SIETNAENGQIISGQLQSITVGIEDMFLKAIIPADIAEDGVPGYYSEVFHALWEACCTSS
NTGRETFPLKGGKGVTAINGTRSVKLLEVPAMSLIRAVERHLAPFVVSVMGEPLVNIVKD
GGAIRDIIWKDGASDSALDVTTSVNDYEEEPLQLKYIDEEDDRESNVNISNRNIGCFLVL
IFLPPRFHLLFQMEVCELSTLVRIRTDHWPCLAYIDDYLEALFLS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaagccgccattaaaatacctctcaccccaagattgggagctcctcattgaa
gacttccaatacgacgtcgtacgccgcgagaaatggacatcccactactccccactctcc
atcctcgacctcgccctctcctccattctccgcaaggacttccccctcaagctctctctc
atctccttcctcgaagagttctccgattctctcttccgcaatttcgaagtccaactcgcc
ctcgaccgcctcatcgatgccgtcagatcggtggttcaagctcctcatgatgctgtctcc
ttctcctccgcgctcaaggagcgaatggtggttgcggtcacctccattttgatatgcatt
ggaaatgatgtcgaagtttgcctaggccaactggagagcttggtggagttgcttttgaca
attgtgaatcggccgagtcatggggcggatcggcagatgagagcggtggcctgcgagtgc
ttgcgggagttggagagggcgttcccgtgcttgctggcagagatcgcggggcatatttgg
ggattgtgccagagcgagcgaactcacgcttcgcagagctacattctgttgttcacattg
gtgatacataatattgtgtctaggaaggtgaatgtatcgattttaaatacatcggtgcct
ttggtgcccttcaatgtgccccaatttgtggttggaggttcgagcagggaggtttcgggg
ttgaattttaaggagctgaggagagtgatggcgtttttgttggaatcgccgcagattttg
actcctagcgcgatgatggagtttatgtcgttggtgatgccggtggcgttggtgttggag
ttgcaggcatcgatgttgaaggtgcagttctctggcctgctttactcctatgatcccatg
ctatgccatgttgttctgatgatttattcgcgtttcgtagatgcgtttgatgggcaagag
gccagcatcgctcgccggcttgtgttgatctcgagggaggcccagctccctcttgttttt
cgcttgcttgccctccattggttgttgggtttcattggattggtaccggatagcggcggg
aggaagaaacagtcaattgttgaaataggtttgggatttttttacccgtccgtctttgat
ccgcttgcactgaagtcattgaagcttgaccttcttgccttctgtgccatatgtctcaac
acattgagtgcggataatatgggaggagggtcaagtgaggtggcagggccccgagtatct
gtggtgaagctatttgaggatggccttgtctctgtatccgcgttcaagtggttgcctcca
tggagcacagaaactgcagtggcattccgcacctttcacaaattcctgataggtgcccgg
tctcattctgatactgattcttccaccaatagaaccctgatggagtctaccatcttccac
actctagagaggctgcttgtggagatgacattggagtttcagagattggttccagtaatt
gttgcttttgttgaccgtttgttgctctgtcacaagcatcgttggttgggagaacgcttg
cttcagacatttgatcagcatttgcttccaaaagccaccatagactatagattggcttct
tatttcccaatttttgatagaattgctgagaatgatactgttcccgcttgtggattgttg
gagctgcttaccaaatttattgtttcccttgttgaaaaacatggcccagatacgggattg
aaatcttggtctctgggaagtaaagttcttggcatttgccggacgttgatgatacaccac
catagttctagattattccttggattatctcgtctcctcgcattcacttgcctgtatttt
cctgatttagaggttcgggacaatgcaaggatctacctgcggatgctgatctgtatacca
ggaaagaagcttagacacatattgaacctcggggcacaagtccctggaattgcgccatct
ccacataccagctcattcttcaatgttcagtctcctcggccttctcgtgatcttaagaaa
tccaggaatatctcttcttacattcaccttgagcgtgtaataccactgcttgtaaaacaa
tcttggtccttgtctttgccaactttgggtattgggggtgacaaacctggttatctggag
aatatcatggacagtgaacccccagttgccatggaaagggaggttgatggcagtagtagt
atacaaatcatctctgagactgaaaaaattgatcatccacaggagcctttacgtgtgatg
gattcaaagatttcagagatcctaggaatattgaggcggcatttttcatgtattccggat
ttcagacacatgccagggcttaagattagaatatcctgtagtttgagatttaaatctgag
cccttcaatcgtgtatggggggctgatgtgcctgctgctgatttggatggtgtagatgca
cttcctgccatatatgcaactgtgctcacgttttcatcttcggcaccttatgggtctatc
ccatcatttcacataccctttttacttggtgaacctcccacaaatggttattcctcaggc
caaaagggctcattggatattgtccctgttgaaaatggttcagaagaggaagtaagtttc
agggctcctgtaatgattgaattggaaccacgggaaccaatgcctggtcttgttgatgtt
tccattgaaacaaatgcagaaaatggtcagatcataagtggacagcttcagagtatcaca
gtgggcattgaagacatgtttctcaaggccattatcccagccgacattgcagaagatgga
gtccctggttattactcagaagtgttccatgctctgtgggaggcatgttgtacttcatcc
aacactgggagggagaccttccctttgaaaggaggcaaaggagtgacagcaatcaatggg
acccgatctgttaagctccttgaagttcctgcaatgtctttgatccgggcagttgagcgc
cacttggcaccctttgttgtaagtgtgatgggtgaaccccttgttaacattgtaaaggat
gggggagcgatcagagacatcatctggaaggatggagcctcagattcagccctagatgtt
accacctcggttaatgattacgaggaggagccactccaactcaagtacattgatgaagaa
gatgacagagagagcaatgtgaacatcagcaacagaaacattgggtgctttctggtcttg
atatttcttccaccaaggttccatctcctttttcaaatggaggtatgtgagctctcaact
ttagttcggattagaactgatcactggccatgcctagcttatattgatgattatttggaa
gctttgtttttatcatag
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