KEGG   Vitis riparia (riverbank grape): 117918251
Entry
117918251         CDS       T07274                                 
Name
(RefSeq) probable E3 ubiquitin ligase complex SCF subunit sconB
  KO
K14963  COMPASS component SWD3
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    117918251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vri03036]
    117918251
Chromosome and associated proteins [BR:vri03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     117918251
    NSL complex
     117918251
   HMT complexes
    COMPASS/SET1 complex
     117918251
    COMPASS/SET1 complex (yeast)
     117918251
    MLL-HCF complex
     117918251
    MLL3/MLL4 complex
     117918251
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     117918251
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR36-Utp21_1st WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_NWD2_C Beta-prop_WDR90_POC16_2nd Beta-prop_ACSF4 Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 117918251
NCBI-ProteinID: XP_034690646
LinkDB
Position
7:complement(29349359..29356202)
AA seq 316 aa
MNTDGLEDGGKPAPSGELVESQILSSESQDSEKVVENRANDILSKEEVQIQTPGATENFS
VCSGRVTSVHFNHDKSLIVSGSHDCSCKVWAFDTGALLKTLVEDNGPTISFARFSLDGKS
ILVATLDDTLKLWNYSARKSLKIYTGHLNKVYCIASAFSVTYGQYIVNGLEDNCVYAWDL
QGKNPFQKLEDPAAAGLQVTSDGKPKILDVPDRTGGEDIDTSTVVKADSDDCLRGVSGAT
LVANSSCKNPSGEWHVGYKFVYEFFFTDTLTSRLGKERGKKWDEKYHEAVADTAKNLDGF
DQKHIKVEDAQLEKGS
NT seq 951 nt   +upstreamnt  +downstreamnt
atgaatacagatggattagaagacggtggaaagcctgcaccatctggagaattagttgag
agtcagatcttgtcttcagaaagtcaggacagtgaaaaagttgttgagaatcgagctaat
gatattttatcgaaggaggaagtgcagatacaaaccccgggtgcaacagaaaactttagt
gtctgttctggaagagtcacttccgtccatttcaaccatgacaaatctctcattgtctcc
ggcagtcacgactgctcctgcaaggtctgggccttcgacaccggcgctctcttaaagacg
ctcgtcgaggacaatggtcccaccatttccttcgccaggttctctctcgacggcaagagc
attctcgttgctactctagatgatactctgaagctttggaactactcggctaggaagtcc
ttgaaaatttatacaggtcatttaaacaaagtatattgcatagcatccgcatttagtgtg
acttatgggcaatacattgttaatggattagaggataactgcgtttatgcgtgggacctg
caagggaagaatccatttcagaaactagaagacccagctgccgctgggttacaagttacc
tcagacgggaaaccgaagatccttgatgttcctgatcgcactggcggtgaagatattgat
acctcaactgtggtgaaggctgattcagacgattgtcttcgtggagtatcaggagcaact
ctggttgcaaattcttcgtgtaagaatccttctggggagtggcatgtgggttataaattc
gtatatgagtttttttttacagacacgttgacttctcgtttggggaaagaaagagggaaa
aagtgggacgaaaagtatcacgaagcagtagctgacactgcaaagaatcttgatggattt
gaccagaaacacatcaaagtggaggatgcacagttggaaaaaggctcgtga

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