Vitis riparia (riverbank grape): 117934057
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Entry
117934057 CDS
T07274
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117934057
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117934057
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117934057
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117934057
Spliceosome [BR:
vri03041
]
Common components
Common spliceosomal components
SR proteins
117934057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117934057
NCBI-ProteinID:
XP_034711546
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All DBs
Position
2:19551875..19555445
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AA seq
252 aa
AA seq
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MHSTAQIHPRHLANIKQLRVNPPHPHPNLCSRVSLFDSNPEMPYSREGRSVSPANSGSPI
RGRRSRSRSRSRSLSRSRRSRSRSRDSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGK
VVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYLNRSVLEGRLITVEKAKRRRGRTPT
PGRYHGLRERRGRGGRRRSRSYSPRRWQDRDSYARDRRGRSRSPYGRRSDDYSDSNRRRR
ERSLSGAGRDYP
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaacagcccagattcacccacgccatctagcaaatataaagcaactccgagtc
aaccccccacacccacacccaaatctctgttctagggtttctctcttcgactctaaccca
gagatgccttattcaagggaaggaagatctgtttcacctgccaactcgggttcacccatt
cgggggcgacgatcaaggtcaaggtcgaggtcaaggtcattgtcgaggtctaggaggagt
cgctcgaggagccgcgactcggtagatgctgttaacccgggaaataacttgtatgtgacg
ggtttgtcaacaagagttaatgccagtgatcttgagaagtattttaacagtgaagggaag
gttgttgagtgccatctggtaacagatcctcgcaccagagaatcccgtggatttggtttt
gtcactatggagactgttgaggatgcagaccgctgtattaaatatcttaatcgttctgtg
cttgaaggtcgcctcatcactgtggaaaaggcaaaacgaaggcgtgggaggaccccaacc
ccaggaaggtatcatgggctgagggagaggcgaggacgaggtggccgcagaaggtctcgg
agctactcccctcgccgctggcaagatagagactcttatgcaagagacaggcgtggaaga
tctcgctccccatatggcagaaggtccgatgactactccgactccaataggaggcgcagg
gagcgttcattgtcaggggcaggcagggactacccttga
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