Veillonella rodentium: 44547418_00598
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Entry
44547418_00598 CDS
T05216
Symbol
ffh
Name
(GenBank) Fifty-four homolog
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vrm
Veillonella rodentium
Pathway
vrm02024
Quorum sensing
vrm03060
Protein export
vrm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
44547418_00598 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
44547418_00598 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
44547418_00598 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vrm02044
]
44547418_00598 (ffh)
Enzymes [BR:
vrm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
44547418_00598 (ffh)
Secretion system [BR:
vrm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
44547418_00598 (ffh)
Eukaryotic Sec-SRP protein
44547418_00598 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
APS_kinase
nSTAND3
AAA_30
ParA
6PF2K
AAA_16
AAA_33
AAA_31
ArsA_ATPase
Mod_r
cobW
MeaB
Thymidylate_kin
AAA_17
AAA_18
nSTAND_NTPase7
ResIII
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
SNV60607
UniProt:
A0A239YPA5
LinkDB
All DBs
Position
1:673718..675070
Genome browser
AA seq
450 aa
AA seq
DB search
MAFDSLSEKLQDAFKSLKGKGKITEDDVNLALRQVRTALLEADVNFMVAKDFVKSIKEKA
LGEEVFGSLNPAQTVIKIVNDELTELLGGTQSRIMISSKPPTIIMLVGLQGAGKTTTAGK
LAVYLRKQGKHPMLVAADVYRPAAITQLQVVGKQIDIPVFADETPGADPVDIARRAVEQS
THMLKDVVIIDTAGRLAIDEPLMQELSNIKAAVRPHEILLVVDSMIGQDAVSTAQTFNEK
LGVDGVILTKLDGDARGGAALSIKAVTGLPIKFTGVSEKMDGFDVFYPDRMASRILDLGD
FKTLIENVQGAIDEEEAREMAKKMAKNNFTLDDFLKQMNQVRKLGPLQNIIGMLPGMGQV
KDQLKDLDLNSKEVRRIEAIITSMTAAERENPNILNGSRRKRIAKGSGTQVQDVNRLLKQ
FEEARKMMKRMKGLRGGKGALPKMPKLPFM
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgatagtttatcggaaaagctgcaagacgccttcaaatccttaaaggggaag
ggcaaaattacagaagacgatgtcaatcttgcgttgcgtcaggtgcgaacggctctttta
gaggcggacgttaacttcatggtggcaaaggattttgttaaatccattaaagaaaaagcc
ctcggtgaagaggtattcggttccctgaatccggctcaaacggttattaagatcgtaaat
gatgagttgacggagttattgggcggtacgcaaagtcgtatcatgatttccagcaaaccg
ccgacgattatcatgttggtcggtctgcaaggtgccggtaagacgacgacggccgggaag
ttagccgtataccttcgcaagcaaggtaagcatccgatgctcgtagcggccgatgtatac
cgtccggcggcgattacgcagttacaggtggtcggtaaacagatcgatattcctgtcttt
gcggatgaaactccgggtgctgacccggtggatatcgctcgtcgcgctgtggagcaaagc
acgcatatgttaaaggatgttgttatcatcgatacagcaggtcgcctggcgattgatgag
cctttgatgcaggaactgtccaatatcaaagcggctgtccgacctcatgaaatcctgctt
gttgtggactccatgatcggtcaggatgcggtgtcgacggctcagacattcaatgaaaaa
ttgggcgttgacggtgttattctcacaaaactcgatggcgatgcccgcggtggtgcggca
ttatccatcaaggctgtaacgggcttgccgatcaagttcaccggtgtcagcgagaagatg
gatggattcgatgtattctatccggatcgtatggcttcccgtattctcgacctgggcgac
tttaaaacactgattgaaaatgtgcaaggcgccatcgacgaggaagaagcccgtgaaatg
gccaagaaaatggcaaaaaacaatttcaccttggatgacttcctgaaacagatgaatcag
gtgagaaagttagggccgttgcagaatatcatcggcatgttgccgggcatgggtcaggtt
aaggatcaattaaaggatcttgatctgaacagtaaagaggtgcgtcgcatagaggccatc
ataacatccatgaccgcagcggagcgggagaatccgaacatactcaacggatcccgtcgc
aagcgtatcgcgaaaggttcgggtacacaggtacaagatgtaaatcgtttgttgaaacaa
tttgaagaagcgcggaagatgatgaagcgcatgaaagggttacgaggcggtaagggcgct
ttacctaagatgcctaaattaccgtttatgtaa
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