Vibrio rotiferianus: BSZ04_24275
Help
Entry
BSZ04_24275 CDS
T05115
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
vro
Vibrio rotiferianus
Pathway
vro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSZ04_24275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vro03021
]
BSZ04_24275
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_24275
Enzymes [BR:
vro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSZ04_24275
Transcription machinery [BR:
vro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSZ04_24275
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSZ04_24275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ASI97934
UniProt:
A0A510I910
LinkDB
All DBs
Position
2:3294426..3298454
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGTRPQVLDIPYLLSIQLDSFDKFIEQDPEGQYGLEAAFRSVFPIQ
SYNGNSELQYVSYRLGEPVFDVKECQIRGVTYSKPLRVKLRLVIFDKDAPAGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARVIPYR
GSWLDFEFDPKDNLYVRIDRRRKLPASIILRALGKTSEEILDIFFEKVNFEVKDQTLLME
LVPDRLRGETASFDIEANGKTYVEQGRRVTARHIRQLEKDGVDHIEVPVEYIVGKVASKD
YVNEATGEIIVNANQEISLEALANLSQAGHKALEVLFTNDLDHGPFMSETLRIDSTVDRI
SALVEIYRMMRPGEPPTKEAAEALFESLFFSEERYDLSTVGRMKFNSSIEREDALEQGTL
DEQDIIEVMKKLIAIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDAIMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHVTHYGRLCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVDGVVT
DEVDYLSAIEEGQFVIAQANAALTEEGGFADELITARQKGESGLHPREHAQYMDVATNQV
VSIAASLIPFLEHDDANRALMGANMQRQAVPTLKADKPLVGTGIERNVAVDSGVTAVAKR
GGVIQSVDASRIVVKVNEEELVPGEAGIDIYNLTKYTRSNQNTCINQRPCVMPGEPVSRG
DVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELTCVA
RDTKLGSEEITADIPNVGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDTSLRVPNSVSGTIIDVQVFTRDGVEKDKRALEIEQMQLKEAKKDL
TEEFQILEGGLLNRVRAVLIDGGYSEAKLDATDRKKWLELTLEDDALQTQLEQLAEQWDE
LKADFDKKFETKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PVEDMPYDEKGQPVDIVLNPLGVPSRMNIGQILEVHLGLAAKGIGDKINQMVKEQQELAK
FREFLQKVYDLGETRQKVDIASLSDDEVRTLIKNLRGGLPIATPVFDGAPEASIKALLKL
ADLPESGQLKLFDGRTGDQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGG
KAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHSMEPGMPE
SFNVLLKEIRSLGINIELEDEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcttataccgagaaaaagcgcatccgtaaggactttggtactcgtccacaa
gttttggacattccatacctgctatcgatccagctcgattcgttcgacaaattcatcgaa
caggatcctgaaggtcaatacggtcttgaagctgctttccgttctgtattcccaattcag
agctacaacggcaattctgagctgcaatacgttagctaccgtcttggtgagccagttttt
gacgttaaagaatgtcaaatccgcggtgtaacttactcaaagccactacgcgtaaaacta
cgtctagtaatctttgataaagacgcaccagcaggtactgtaaaagacattaaagaacaa
gaagtctacatgggcgaaattccgcttatgacagacaatggtaccttcgtaatcaatggt
accgagagggttatcgtatcccagctgcaccgaagcccaggcgtgttcttcgacagcgat
aagggtaagacccactcttcaggtaaagttctatataacgcacgtgtaattccttaccgt
ggctcatggctagactttgagttcgatcctaaggataacctatacgtacgtatcgaccgt
cgtcgtaagctaccagcatcgatcatccttcgtgcacttggtaaaacgtcagaagaaatc
ctagatatcttcttcgagaaagtgaacttcgaagtgaaagaccaaactctacttatggag
ttggttccagatcgtctacgtggtgaaactgcgtcattcgatattgaagcgaacggtaag
acttacgttgagcaaggtcgtcgcgttacagctcgtcatatccgccaactagaaaaagat
ggcgttgatcacatcgaagtaccagttgagtacatcgttggtaaagttgcatcgaaagac
tacgttaacgaagcaacaggcgagatcatcgtaaacgctaaccaggaaattagcctggaa
gctctagcgaacctatctcaggctggccataaagcgctagaagttctattcacgaacgat
ctagaccacggtccattcatgtcagaaacgctacgtatcgacagcactgttgatcgtatt
tctgcgctggtagaaatctaccgcatgatgcgccctggtgagccaccaacaaaagaagct
gcagaagctctattcgaaagcctattcttctctgaagagcgctatgacctatcaactgtt
ggccgtatgaagttcaacagttctatcgagcgtgaagatgctctagaacaaggtacgctt
gacgagcaagacatcatcgaagtgatgaagaagcttattgcgatccgtaacggtaaaggc
gaagtggacgatatcgaccacctaggcaaccgtcgtatccgctctgtaggcgaaatggct
gagaaccaattccgtgttggtcttgtgcgtgttgaacgtgcagtgaaagagcgcctaagc
cttggtgaccttgatgcaatcatgcctcaagatctaatcaacgctaagcctatttcagca
gcagttaaagaattctttggctcttcacagctttcacagttcatggaccaaaacaacccg
ctatcagaagtaacgcacaagcgtcgtatttctgcattgggtcctggcggtctaactcgt
gaacgtgctggcttcgaagtacgtgacgtacacgtaactcactacggtcgtctatgtcct
atcgaaacgccggaaggtccaaacatcggtctgatcaactctctatctgcgtttgcgcgt
tgtaacgagtacggcttcctagagacaccataccgtcgcgttgtagatggcgttgttaca
gacgaagtagattacctatctgcaatcgaagaaggccaattcgttatcgcacaggctaac
gctgcgctaactgaagaaggcggttttgcagatgagctgatcacagctcgtcaaaaaggt
gaatctggtctacaccctcgtgagcacgctcagtacatggacgttgcgacaaaccaggtt
gtatctatcgctgcatcgcttatcccgttcctagaacacgatgatgcgaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcagttccaacactgaaagctgacaaaccgcttgtt
ggtactggtattgaacgtaacgtagcagttgactcaggtgtaactgcagttgctaaacgt
ggtggtgtaatccagtcagtagatgcttctcgtatcgttgttaaagtgaacgaagaagaa
ctagtaccaggcgaagctggtatcgacatctacaacctgactaaatacacacgttctaac
cagaacacatgtattaaccagcgcccatgtgtaatgccaggtgaacctgtatcacgtggt
gatgttcttgctgatggtccttcaacagacctaggtgaactagcgcttggtcaaaacatg
cgtatcgcgttcatgccttggaacggttacaacttcgaagactcgatcctagtatctgag
cgcgtagttcaagaagaccgcttcacgactatccacattcaagaacttacttgtgtggcg
cgtgatactaagcttggttctgaagagatcactgctgatattccaaacgtaggtgaatct
gctctgtctaaactagacgagtcaggtatcgtttacatcggtgctgaagttaagggtggc
gacatcctagttggtaaagtaacacctaaaggtgaaacccagctaacgcctgaagagaag
ctactacgtgcaatcttcggtgaaaaagcatctgacgttaaagatacttcactacgtgta
cctaactctgtttcaggtacgattatcgacgttcaagtcttcactcgcgatggcgtagag
aaagacaagcgtgcgcttgaaatcgagcaaatgcagcttaaagaagcgaagaaagaccta
actgaagaattccagattcttgagggtggccttctaaaccgtgttcgcgctgtattgatc
gatggcggttactctgaagcgaaactagacgcaactgatcgtaagaagtggctagaacta
acgctagaagatgacgctctacaaactcagctagaacaactagcagagcagtgggacgag
ctaaaagctgacttcgataagaaattcgaaactaagcgtcgtaagatcacacaaggtgat
gatctagcacctggcgtactgaagatcgttaaggtttacctagcggttaaacgtcgcatc
cagcctggtgataagatggcgggtcgtcacggtaacaagggtgtaatctctaagatcaac
cctgttgaagacatgccatacgatgaaaaaggtcagcctgtagacatcgtacttaaccca
ctgggtgtaccttcgcgtatgaacatcggtcagatccttgaagtacacttaggtctggca
gcgaaaggtatcggtgacaagatcaaccagatggttaaagagcagcaagaactagcgaaa
ttccgcgagttcctacagaaagtttacgatctaggcgaaactcgccagaaagtagacatt
gcttctctatctgatgacgaagttcgtactctgatcaagaacctacgtggcggtctacca
atcgcgactccagtatttgacggtgcaccagaagcgtctattaaagcgctactgaaacta
gcagacctaccagaatctggtcagctaaaactgtttgatggtcgcacgggtgaccagttt
gagcgtcctgtaacagtaggttacatgtacatgctgaaactgaaccaccttgttgatgac
aagatgcacgcacgttcaactggttcgtacagcctagtaactcagcagccacttggtggt
aaagctcagttcggtggtcagcgtttcggtgagatggaagtatgggcactagaagcatac
ggtgctgcttacactctacaagaaatgctaacggttaagtcggatgacgttaacggccgt
actaagatgtacaaaaacatcgtagacggtaaccacagcatggaacctggtatgccagaa
tcgttcaacgtattgttgaaagagattcgctcgctaggtatcaacatcgagctagaagac
gaagagtaa
DBGET
integrated database retrieval system
