Vibrio ruber: RND59_09230
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Entry
RND59_09230 CDS
T09542
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
vru
Vibrio ruber
Pathway
vru00040
Pentose and glucuronate interconversions
vru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RND59_09230
Enzymes [BR:
vru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
RND59_09230
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Gene cluster
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Motif
Pfam:
Pectate_lyase22
Tricorn_N
Tricorn_2nd
Motif
Other DBs
NCBI-ProteinID:
WNJ94350
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Position
1:complement(2026530..2027693)
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AA seq
387 aa
AA seq
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MAKGDVISLDFESFIDSDTQVKVTRLTPKDVICHRNYFYQKCFTEDGQKLLFAGDFDTNR
NYYLLDLTTRQATQLTEGSGDNAFGGFISSDEQSFFYVKNERNLMKVDFKTLEETRIYTV
DEAWKGYGTWVANSSCTKLVGIEIHKDSWQPLTSWEKFAEFYHTNPTCRLIQVDIATGDV
KVIHQENAWLGHPIYRPFDDQTIGFCHEGPHDLVDARMWLVDGDGNHVRKVKSHAPGESC
THEFWIPDGSAMAYVSYLKGQSERLICRVDPQTLNNEVVMEMPPCSHLMSNFDGSLMVGD
GCDTPPDVNDTDSYNIENDPFLYILNTQKKTFSRLAKHNTSWQVLDGDRQITHPHPSFTP
NDQGVLFTSDFEGVPAVYIADLPEELK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggtgatgtcatcagccttgattttgaaagcttcattgattcggatacacag
gtcaaagtgacacggctgacccccaaagatgtgatctgtcatcgcaactatttttatcag
aaatgttttaccgaagacgggcaaaaattactctttgccggtgacttcgataccaaccga
aattactatctgctcgatctcaccacccgacaagcaacacaattgacggaaggctccgga
gacaacgccttcggcgggtttatttcatccgatgagcaaagttttttctatgtcaaaaat
gaacgcaacttgatgaaagttgatttcaaaacgctcgaagaaacacggatttatactgta
gatgaagcatggaaaggttacggtacctgggttgccaactcctcttgtaccaaactggtc
gggatagaaatccataaagatagctggcagccactcacctcatgggagaagtttgctgag
ttttatcataccaatccgacctgccgcctgattcaggtcgatattgccaccggagacgtc
aaagtcatccatcaggaaaatgcttggctgggtcacccgatctatcgcccgtttgatgat
cagactatcggattctgtcatgaaggcccccatgatctcgtcgatgcaagaatgtggctg
gtggacggggatggtaatcacgtccgcaaagttaaatcccatgcaccgggcgaatcctgt
acccatgaattctggattcccgacggcagtgccatggcttatgtttcctatctgaaagga
caaagtgaacggcttatctgtcgtgttgatcctcaaacactaaacaatgaagtcgtcatg
gaaatgccgccatgttctcacttaatgagtaactttgacggctcgctgatggtcggtgac
ggatgtgacacaccaccggatgtgaacgataccgatagctacaacatcgagaatgatcca
tttctctatattctcaatactcaaaagaaaacattctcccgattagcaaagcacaataca
tcttggcaagtgctcgatggtgatcgtcaaattacccatccgcatccttcctttacacca
aatgatcaaggagtattatttaccagcgactttgaaggtgtaccggcagtgtatattgct
gatctgcccgaagaactaaaatag
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