Vibrio scophthalmi: VSVS12_00878
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Entry
VSVS12_00878 CDS
T04650
Symbol
lpxB
Name
(GenBank) Lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00540
Lipopolysaccharide biosynthesis
vsc01100
Metabolic pathways
Module
vsc_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VSVS12_00878 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
VSVS12_00878 (lpxB)
Enzymes [BR:
vsc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
VSVS12_00878 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
Lipid A
VSVS12_00878 (lpxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
ANS84666
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All DBs
Position
1:937121..938272
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AA seq
383 aa
AA seq
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MERPLRIGIVAGELSGDTLGEGFIKAIKLRYPDAEFVGIGGPKMMQQGCQSLFDMEELSV
MGLVEVLGRLPRLLKVKAELVKYFTQNPPDVFIGIDAPDFNLRLELDLKNAGIKTVHYVS
PSVWAWRQKRIFGIAKATNLVLAFLPFEKAFYDKFNVPCEFIGHTLADAIPLESDKAPAR
ELLGLAQDKSWLAVLPGSRGSELNMLAEPFIQACKRLHAQQPDLGFVVALVNQKRREQFE
AAWREYAPELEFVLVDDTAKNVITAADAVMLASGTVALECMLIKRPMVVGYKVNAFTAFL
ARRMLKTKYVSLPNILADQALVKEFLQQDCTPENLSQEVLQLLGQYGDDMVEKFTEMHHW
IRKDADTQAANAVLSLIGKSKQA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggccactacgaatcggtatcgttgcgggtgaactctcaggggatacgctggga
gaaggctttattaaagcgattaagttgcgttacccagatgctgagtttgttggcattggc
ggacctaagatgatgcagcagggctgccaatcattgtttgatatggaagagctttccgtg
atgggtctagtcgaagttttaggccgtttgccgcgtttgctgaaagttaaagcagaactg
gtaaagtacttcactcaaaatccacccgatgtgtttattggcatcgatgcgcctgatttt
aaccttcgccttgaacttgatctgaaaaatgcgggcattaaaacggttcactatgtcagc
ccttctgtttgggcttggcgtcaaaagcgtattttcggtatcgcaaaagccacgaatttg
gttttggcttttctcccatttgaaaaagcattttacgataagtttaatgtgccttgtgag
tttattggtcataccttagccgatgcaattcctctcgagtcggataaagcccccgcccga
gaactgcttggtcttgcgcaagataaatcgtggctggcggtattgccgggcagtcgtggt
agcgaattgaatatgttggcagagccttttattcaagcttgtaaacgcttgcatgctcaa
cagccagatttaggttttgttgtcgcattggttaatcagaaacgtcgtgaacagtttgaa
gctgcttggcgagaatatgccccagagcttgagtttgtcctggtcgatgataccgctaag
aatgtgatcacagcagctgatgcggtgatgttggcttcaggcaccgttgctctagaatgt
atgctgatcaagcgaccaatggttgtaggctataaagtgaatgcgtttaccgcctttttg
gcgcgtcgtatgttgaaaacgaaatatgtttctttaccgaatattttggccgatcaagcg
ttagtcaaagagtttcttcagcaagattgtaccccggagaatttgagccaagaagtgctg
caattgttagggcaatacggtgacgatatggtagaaaagtttaccgagatgcaccattgg
attcgtaaggacgccgatacgcaagcggccaacgcggtactaagtttaattggaaagagc
aaacaagcatga
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