Vibrio scophthalmi: VSVS12_04457
Help
Entry
VSVS12_04457 CDS
T04650
Symbol
trmY
Name
(GenBank) tRNA (pseudouridine(54)-N(1))-methyltransferase
KO
K16317
tRNA (pseudouridine54-N1)-methyltransferase [EC:
2.1.1.257
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsc03016
]
VSVS12_04457 (trmY)
Enzymes [BR:
vsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.257 tRNA (pseudouridine54-N1)-methyltransferase
VSVS12_04457 (trmY)
Transfer RNA biogenesis [BR:
vsc03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
VSVS12_04457 (trmY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrn_RNA_2
RBM39linker
Motif
Other DBs
NCBI-ProteinID:
ANS88155
LinkDB
All DBs
Position
pVS127:complement(65219..65821)
Genome browser
AA seq
200 aa
AA seq
DB search
MNKAFVIRARAASTDPKTFVAGVGADAHSEILAHVLMNAIFTAQSHRDDVTVYLVIESTS
DFSRTLCFESSLLSNIGGFHESALIALIAKALEHSIGMKKEESRKVTGGLSVETTSFEKL
VQRLAENYTLYLLDKKGTDIHDEPFNGNACFILTDHIPMPKKSWNSLKRLGTQKISLGPQ
MLFASQCIVLIHNEFDRRGW
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcttttgtgatccgcgcgcgtgcggcatcaactgatccaaaaacgtttgtg
gcaggagttggcgctgacgcccactctgaaatcctagctcacgttttaatgaatgcgatc
tttacggctcaatctcaccgagatgatgtcacggtttatttggttattgaaagcacatct
gatttttctcgaactctatgctttgagtcctctttattgagtaatattggtggttttcat
gaatcggcgttgatcgcgcttattgctaaagcattagagcactcgattggcatgaaaaaa
gaagaatcacggaaggtgactggcggtttaagtgttgaaaccaccagtttcgaaaagtta
gttcagcgcctagcggagaattacacactctatctgctcgataaaaaaggaacggacatt
cacgacgaaccgtttaatggcaatgcttgtttcatcttaactgaccatataccgatgccc
aaaaagagttggaacagcttaaagcgtttggggacacaaaagattagccttgggcctcaa
atgttatttgcgtcacagtgcatcgtgcttatacacaatgagtttgatcgtcgaggttgg
tga
DBGET
integrated database retrieval system
