Vibrio mediterranei: BSZ05_03280
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Entry
BSZ05_03280 CDS
T04936
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00190
Oxidative phosphorylation
vsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
BSZ05_03280
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSZ05_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsh03019
]
BSZ05_03280
Enzymes [BR:
vsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
BSZ05_03280
Messenger RNA biogenesis [BR:
vsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BSZ05_03280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
ASI88932
UniProt:
A0AAN1KM48
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All DBs
Position
1:712762..714870
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AA seq
702 aa
AA seq
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MSAEKLYIEKELSWLSFNERVLQEAADKTVPLIERIRFLGIFSNNLDEFYKVRFSDVKRR
ILINQESGINDNSKHLLGKMQSKVLKLNLRFDELYNELILEMARRRIFLVNETQLSDTQQ
KWVKKYFRNEVLPHLTPFMLGEDINVLQFLKDEYAYIVVDMQKEQSSQYAILEIPTDHLP
RFVMVPEQKGKRRKTIILLDNIIRYCLDDIFRGFFDYDELNGYAMKMTRDAEYDLSLEVE
HSLLEQMSESVNQRLTAMPVRFVYERDMPEEMLNTLCSKLGISNYDSLIPGGRYHNFKDF
IGFPNVGREYLENKPLPPMRCADFDGYDNQFEAIRAQDILLHFPYHTFDHITELVRQASF
DPKVIGIKINVYRVAKDSRLMNSLIDAVHNGKNVTVVVELQARFDEEANIEWSRVLTENG
VQVIFGAPGLKIHAKLLLISRREEGEITRYAHIGTGNFHEKNARIYTDFSLLTADQEIAN
EVRNVFGYIENPYRPVKFNYLIVSPRNSRKQLYRLIDTEIANAKAGKKGKLTLKINNLVD
KGLINKLYGASNAGVKIQMIIRGMCSLVPGVEGVSDNIKIISIVDRFLEHPRVIIAHNNG
DPQVYISSADWMTRNIDHRIEVAAPMRDTRLKQRIIDIINLHFTDTMKARWIDKEMSNSY
VPRGNRKKVRSQMAIYDYLKKVEKQTRKTKEQPSNNEPDQGQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggaaaaactctatatcgaaaaagaacttagttggctctcttttaacgagcga
gtgctgcaagaagccgcagacaagaccgtcccactgattgaacgcattcgctttttaggg
attttctccaacaacctcgatgagttttacaaagttcgtttctctgacgtaaaacgtcgt
atcctcattaaccaagaaagtggtattaacgacaactccaagcatctactgggtaagatg
caaagtaaggtactcaagcttaacttacgatttgatgaactctacaacgaactgatttta
gagatggctcgtcgtcgaatcttcctagttaatgaaactcagttaagtgacacgcagcaa
aagtgggtaaagaaatactttagaaatgaagtactgcctcacttaacgccttttatgctt
ggtgaagacattaacgtactgcaatttcttaaagatgagtacgcttatatcgttgtcgat
atgcaaaaagaacagagttctcaatatgcgatcttagagatccctactgatcacttaccc
cgttttgtcatggttccggaacagaaaggtaaacgccgtaaaaccatcattctgctcgac
aacatcattcgttattgtcttgacgatatattccgcgggttctttgattacgatgagctt
aatggctatgcgatgaaaatgacgagggatgcggagtacgacttgagtctcgaagtagaa
cacagcctgctcgaacaaatgtctgagagtgtcaatcaacgactgaccgccatgcccgta
cgctttgtttatgagcgtgatatgcccgaagaaatgctaaataccttgtgcagcaaacta
ggcatttctaactacgatagcctaattcccggtggtcgctatcacaactttaaagacttt
atcggctttccaaatgttggacgtgaatacctagaaaacaaaccactacctccaatgcgt
tgtgccgatttcgatggttacgacaaccagtttgaggccatacgtgctcaagatatttta
ctccatttcccctatcacaccttcgatcatattactgagttagtgcgtcaagcctcgttt
gaccctaaggtcattggtatcaaaatcaatgtatatcgagtcgcgaaagactcccgtttg
atgaactcgttgattgacgcagtacacaacggtaaaaatgtcacggtagtggttgagcta
caggctcggtttgatgaagaagccaacattgaatggtccagagtgctcaccgaaaacggg
gtacaagtgatctttggtgctccggggttaaaaatacacgctaagttactgctgataagt
cgccgagaagagggcgagattacccgctacgctcacattggcactgggaactttcatgag
aagaacgctcgcatctataccgacttttctttgctaactgccgatcaagagatcgcgaat
gaagttcgtaacgttttcggctatatcgaaaacccttatcgcccagtgaagtttaactat
ctcatcgtctccccacgtaactcgcgcaaacaactctaccgactcattgatactgaaatc
gccaatgctaaggcgggcaagaaaggaaaactcactttaaaaattaataacttagtagac
aaaggactgatcaacaagctctacggcgcgagcaatgcaggggttaaaatccaaatgatt
atccgcggcatgtgctctctagttcctggtgttgaaggagtgagcgataacataaaaatt
atcagcattgttgatcgcttcctagaacaccctcgcgtcatcattgcgcataacaatggc
gatcctcaagtctatatctcatctgccgactggatgactcgcaacatagaccatcgtatt
gaagtcgccgctccaatgcgtgacactcgtttaaaacagcgaattatcgacattattaac
cttcactttactgataccatgaaggcacgttggatagacaaagaaatgagcaacagctac
gtaccgcgcggtaaccgtaagaaagtacgctcacaaatggctatttacgactatcttaaa
aaggtagagaaacaaacaagaaaaaccaaagagcaaccgagcaataatgagccagaccaa
ggacagtag
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