Vibrio splendidus: LTQ54_07110
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Entry
LTQ54_07110 CDS
T08240
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
vsl
Vibrio splendidus
Pathway
vsl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LTQ54_07110 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_07110 (uvrA)
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LTQ54_07110 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LTQ54_07110 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_23
nSTAND1
DnaJ_CXXCXGXG
NACHT
ScfRs
Viral_helicase1
MMR_HSR1
AAA_25
zf_C2H2_10
Motif
Other DBs
NCBI-ProteinID:
UOE85763
LinkDB
All DBs
Position
1:1566373..1569204
Genome browser
AA seq
943 aa
AA seq
DB search
MDKIEIRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC
PDHNIPLAAQTISQMVDKVLELPEGSKMMLMAPIVKERKGEHVKTLENLAAQGFIRARID
GETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVGWMDDK
EQEEIVFSANFACPKCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVILDENL
SIAEGAIKGWDQKNYYYFQMLTSLSDHYGFDLYVPFNSLPKKTQEIILKGSGRTEVEFKY
INDRGDIRVKRHPFEGILNTLERRYRDTESSAVREDLAKYISTKSCSSCDGTRLRLEARN
VFIGDTTLPEIVQLSIADALEFFQNLSLSGQRGQIADKVMKEINDRLHFLVNVGLNYLNL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLVHLRDLGNT
VLVVEHDEDAIRCADHVIDIGPGAGVHGGHVVAEGTMQDIIENPNSLTGQYLSGAKEIAI
PKQRTPIDKKKVVEIVGATGNNLKNVTATIPVGLFSCITGVSGSGKSTLINDTFFKVAHT
QLNGATTAVPAQHKKIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE
SRSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRY
KGKTIDEVLEMTVEDAREYFNPVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKL
ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVVKTADW
ILDLGPEGGQGGGEIVAEGTPEDVALVEGSHTARFLKPMLNLK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatagaaattagaggcgctcgtacgcataacctcaaagacattaacctaacc
ataccccgtgataagctgacggttatcactggattatcaggttcaggaaagtcgtcactt
gcgtttgatactctctatgcggaaggtcaacgtcgttatgttgagtctttgtcggcttac
gcccgtcaatttctatctcttatggaaaaacccgatgtcgaccacatcgaaggtttatct
ccagccatctcgatagaacaaaaatcgacctctcacaaccctcgttcaaccgtcggtacc
atcactgaagtctatgactatctaagactgctttacgcgcgagtcggcgagccacgctgc
cctgatcacaatatccccctcgcagcgcaaaccatcagccaaatggtcgacaaggtatta
gaactgcctgaaggctcaaagatgatgctgatggcaccgatcgtcaaagaacgtaagggt
gagcatgtaaagacactggaaaacctagctgcgcaaggctttatccgagctcgtattgat
ggcgagacttgtgatttgtccgatccacccacattggaactgcacaagaagcacaccatt
gaagttgtggtagacagattcaaggttcgtcctgatcttcaacaacgtttagccgaatcg
ttcgagaccacattagagctatctggtggtatcgctgttgtcggttggatggatgataaa
gaacaagaagagatcgtgttctcagctaactttgcttgtccaaagtgtggctacagcatg
caagaacttgagccgcgcctattctcattcaacaatcctgcaggtgcatgtggtacttgt
gatggacttggtgttcaacaatattttgatccaagtcgagtgattttagatgagaaccta
agcattgcagaaggtgcaataaaaggctgggatcagaagaattattactattttcagatg
ctaacgtcgctatcagaccattatggttttgatctgtatgtgccattcaactctctgcct
aaaaagactcaagagatcattcttaaaggatcagggcgtactgaagtggaattcaagtac
atcaatgaccgaggtgatattcgagtcaaacgtcatccgtttgaaggcatcttaaatacg
ctagaacgtcgctaccgcgacactgaatctagcgcggtgcgtgaagatcttgccaagtac
atatcaacgaagtcatgttctagctgtgatggcacgcgtttaagattagaagctcgaaat
gtcttcattggcgataccacactgccagaaatcgttcagctcagcattgctgatgcacta
gagtttttccaaaacttatcgctcagcggtcagcgtggtcagatcgctgataaagtaatg
aaagagatcaatgatcgtctgcatttcttggtgaacgttggtttgaattacctgaaccta
tcacgcagtgcagaaacgctgtctggtggtgaagcgcaaaggattcgtctagcaagtcaa
attggtgctggtttagtgggtgttatgtatgtactcgatgaaccatcaattggcctccac
cagcgcgataatgaacgtctactgcaaactttggttcacctcagagatctaggaaatacc
gtgcttgttgttgaacatgatgaagacgcaatccgttgtgctgaccatgttatcgatatc
ggcccaggtgcgggtgtgcatggtggacacgtggtcgcagaaggcactatgcaagacatc
atcgaaaacccgaattctttaaccgggcaatacctgagcggcgccaaagaaattgcgata
ccaaaacaaagaacgcctatcgacaagaaaaaggtcgtcgagatcgttggcgcaacgggg
aacaacctaaagaatgtcactgcgacgatccctgtaggcttgttcagctgtattacgggg
gtatcggggtcaggtaaatctacactaatcaatgacaccttctttaaagttgcccacact
caattaaacggtgctacaaccgcagttccggcgcagcacaaaaagataaaaggcttagag
catttcgacaaagtgatcgatattgaccaaagccctatcggtcgcacaccaagatcaaac
cctgctacctacactggtattttcacgccaattcgtgagttatttgccggtacccaagaa
tcacgatctcgtggctacaagccaggtcgattcagttttaacgttcgtggtggtcgctgt
gaagcgtgtcagggagacggtgtcatcaaagtagagatgcacttcttgccagatgtgtat
gtgccgtgtgatgtgtgtaaaggtaagcgttataaccgtgaaactttagaagttcgctac
aaaggcaaaaccattgacgaagttctagagatgacagtggaagatgctcgtgaatacttc
aaccctgttcctgttatcgctcgtaagctgcaaacattgatggatgttggcctttcctac
attcgcctcggacaagcagcgacgaccttatctggcggtgaagcgcagcgtgttaaatta
gcgcgtgaattgtctaaacgagacacgggaaaaaccttatacattcttgatgaaccaaca
acaggtcttcatttccacgatatccagcagctattgacggtattacataggctgcgtgat
cacggtaatacggttgtcgtgattgagcacaacctagatgtcgtcaaaacagcagactgg
atcttagaccttggtccagaaggtggtcaaggtggtggtgagattgttgcagaaggtaca
cctgaagatgtggcgttagtcgaaggttcgcacactgctcgcttccttaagcctatgtta
aatttgaagtag
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