Vibrio atlanticus: VS_0201
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Entry
VS_0201 CDS
T00812
Symbol
waaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00540
Lipopolysaccharide biosynthesis
vsp01100
Metabolic pathways
vsp01250
Biosynthesis of nucleotide sugars
Module
vsp_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VS_0201 (waaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsp01005
]
VS_0201 (waaD)
Enzymes [BR:
vsp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VS_0201 (waaD)
Lipopolysaccharide biosynthesis proteins [BR:
vsp01005
]
Core region
VS_0201 (waaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
ThiF
Polysacc_synt_2
NAD_binding_10
adh_short
KR
Phage_T7_Capsid
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CAV17233
UniProt:
B7VHM1
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Position
1:complement(194590..195576)
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AA seq
328 aa
AA seq
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MLYSCEFVFKKVGRNMIIVTGGAGMIGSNIVKALNEAGHNDILVVDNLKDGKKFKNLVDL
DITDYMDRDDFLTQVMAGDDFGHIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCI
EREIPFLYASSAATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVRRLTADATAHNETLS
QITGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSETFKRDFVYVGDVAAV
NLWFLKNGVSGIFNLGTGNAESFEEVAKAVIKHHGKGEIETIPFPEHLKGAYQEFTQADL
TKLRNAGCDVQFKSVAEGVSEYMQSVNR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttgctatactcgtgtgagtttgtattcaaaaaagtaggaagaaatatgattatcgtaact
ggtggtgcaggcatgattggcagcaatattgttaaggcgctcaatgaagcaggccacaac
gatattctagttgtcgacaacttaaaagatggcaaaaaatttaagaacctggttgaccta
gatatcaccgattacatggatcgtgatgactttctaactcaagtgatggctggtgatgat
ttcggtcatattgaggctattttccatgaaggtgcatgttctgcgaccaccgagtgggat
ggcaaatacatgatgctcaacaactatgaatactctaaagagttactgcattactgtatc
gagcgcgagatccccttcttgtatgcttcttctgctgccacttatggtgaaaccgatacc
tttatcgaagagccgcagtacgaaggcgcgctaaacgtatacggctattcaaaacagcaa
tttgataactatgtgcgtcgcttaactgcagatgcaaccgcacacaacgaaacgctttct
caaatcactggttttcgatacttcaatgtctacggtccacgtgaacagcacaaaggcagc
atggcttctgtcgcattccacctaaacaatcaaatgaacgccggtgaaaacccgaaatta
ttcgcaggaagcgaaaccttcaagcgtgattttgtgtatgttggtgatgttgcggccgta
aacctgtggttcttaaaaaatggcgtatcaggtatcttcaacctaggtacaggtaatgcc
gaatcatttgaagaagtcgcaaaagcggtgattaaacatcacggtaagggagagattgaa
accatcccattccctgagcatttgaaaggcgcttaccaagagtttactcaagctgattta
actaagttgcgtaatgccggttgcgatgttcaatttaaatcggttgctgaaggcgtcagc
gagtacatgcagtcagttaatcgctag
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