Varunaivibrio sulfuroxidans: P3M64_00790
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Entry
P3M64_00790 CDS
T08892
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu00190
Oxidative phosphorylation
vsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
P3M64_00790
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P3M64_00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsu03019
]
P3M64_00790
Enzymes [BR:
vsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
P3M64_00790
Messenger RNA biogenesis [BR:
vsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
P3M64_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
SURF2
Motif
Other DBs
NCBI-ProteinID:
WES30944
LinkDB
All DBs
Position
166283..168439
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AA seq
718 aa
AA seq
DB search
MNVLTKDETQTPDLTSIARFFNRELSWLAFNTRVLEEADNKKHPLLERVRFLSISSANLD
EFYMVRVAGLKGQVRAGIASVSQDGLNAAQQLEAIHEEVRRLMQAQHDTWGNLRRELLGE
GIHVLKERDLSAREHEWLDKYFMDHLFPVLTPLAIDPAHPFPFIPNLGFSLVMLLQEEKS
SEMLRALIPVPHLVERFVRLPSRQIRFIPIERVIGLFLDRLFPGFKVVELANFRVIRDSE
MEIDEEAEDLVRTFESALKRRRRGSVIRLGFNDDISAELRDMVMSEFGVDDNATFPVEGI
LGLVDIKQLIVSERPDLLFESFNPRFPERVRDFGGDVFAAIRKKDLIVHHPYESFDVVVQ
FVRQAMNDPQVVAIKQTLYRTSNDSPIVAALIEAAEAGKTVTAMVELKARFDEEANIRWA
RDLERAGVQVVYGFMDKKIHAKVNLIVRREGKMLRSYVHYGTGNYHPITAKIYTDLSFFT
CDPQLCQDASRLFNYMTGYAQPMAMQKLVFSPLTLRSTLLELIDVEIANAKAGKPAAIWV
KVNSLVDQLLIDALYRASCAGVQIDMIIRGICCLRPGIKDLSENIRVKSIVGRFLEHSRI
MCFANGHEMPSRNAKVYISSADWMQRNLDRRIESLVPIENPTVHRQVMDEIMEVSFRDEG
QSWVLDGDGRYVRVDDSGDGFNAHTYFMTNASLSGMGHTAKKGRRPRKSSAAKSAMKP
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtcttgacgaaggatgaaactcagacgccggatttgacctccatcgcgcgtttt
tttaatcgggaactgtcgtggttggccttcaatacccgcgttttggaagaggctgataat
aaaaaacatccccttttggagcgggtccggtttttgtcgatttcatcggccaacctcgat
gaattttacatggtgcgcgtcgccggcttgaaaggacaggtccgcgccgggatcgcctcg
gtcagtcaggatggattgaacgcggcccagcagcttgaggcgatccacgaagaagtccgc
cgcctgatgcaggcgcaacacgacacttggggaaatttgcgtcgggagcttctcggggag
gggatacacgtcctgaaagagcgtgacctcagcgcgcgcgaacatgaatggctcgataaa
tatttcatggatcacctattcccggtgcttacgcctctggcgatcgacccggcccacccg
tttccgttcattcccaatctggggttttccttggtgatgttgctacaggaagagaaatcg
agcgagatgttgcgggcgctcattcccgtgccccatctggtcgaacgcttcgtgcgcctg
cccagtcggcaaatccgttttatccccatcgaacgggttatcggtttatttctggatcgc
ttgtttcccggctttaaagtcgtcgaattggctaatttcagggtgatacgcgacagcgaa
atggaaattgacgaggaggccgaagatctggtgcgcaccttcgaatccgcactcaagcgc
cgtcgccgcggatcggtcatccgtcttgggttcaacgacgatatttccgcagaactgcgc
gacatggtgatgagtgaattcggggttgatgataacgcgacattccctgtcgaaggcatc
ttggggttggtcgatatcaagcagttgatcgtttccgagcgtcccgaccttttgtttgag
tcgttcaatcctcggtttcccgaacgggtgcgggattttggcggcgacgtcttcgccgcg
atccgcaaaaaggatctaatagtccaccatccctatgaaagtttcgatgtcgtggtgcag
ttcgtgcgccaggcaatgaacgatccgcaggtggttgcgatcaagcagaccctttaccgc
acaagtaacgattcaccgatcgtcgccgcgctgatcgaggcggccgaggcggggaaaacg
gtaaccgcgatggtcgaattgaaggcgcgcttcgatgaagaagcgaatattcgttgggcg
cgcgacttggagcgggcgggagtccaggtggtttacggtttcatggataaaaaaattcac
gccaaggtgaacttgatcgttcgccgagaggggaaaatgcttcgttcgtacgtgcattat
ggtacggggaactatcacccgatcacggccaagatttacaccgatctgtcttttttcacg
tgcgatccgcaattgtgtcaagatgcgtcgcgcttgttcaattatatgacgggatatgcg
caacccatggcgatgcaaaagctcgtgttttcgccgttgacgctgcgcagtacgttgctg
gagcttatcgacgttgaaatcgctaacgccaaggcgggcaaacccgcggcgatttgggtc
aaggttaattctctcgtcgatcaattattgatcgatgccctataccgcgcgtcctgcgcc
ggagtccagatcgacatgatcattcggggaatatgctgtcttcgcccggggattaaggat
ttatcggaaaatattcgggtgaaaagtatcgtcgggcgttttttggagcattcccgcatc
atgtgcttcgccaacggtcacgagatgccgtcacgtaacgccaaggtttatatttcctcc
gccgattggatgcagcgaaatttggatcgccgcatcgaatccctggtgccgatcgaaaat
cccactgtccatcgccaggtgatggacgaaatcatggaggtcagttttcgcgatgagggg
cagtcctgggtgttggacggcgatggtcggtacgtccgcgtggacgatagcggtgacggc
ttcaacgcgcacacctatttcatgaccaacgccagtttatcgggtatgggacacaccgcc
aagaagggacgtaggccccgcaagtcatccgccgccaaatcagccatgaaaccgtga
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