Vibrio tapetis subsp. tapetis: A1996
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Entry
A1996 CDS
T05424
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
vta
Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vta03032
]
A1996 (hupB)
03036 Chromosome and associated proteins [BR:
vta03036
]
A1996 (hupB)
03400 DNA repair and recombination proteins [BR:
vta03400
]
A1996 (hupB)
DNA replication proteins [BR:
vta03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A1996 (hupB)
Chromosome and associated proteins [BR:
vta03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A1996 (hupB)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A1996 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Arteri_nsp7a
HU-DNA_bdg
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
SON49975
UniProt:
A0A2N8ZDN2
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All DBs
Position
A:complement(2088434..2088706)
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AA seq
90 aa
AA seq
DB search
MNKTQLVEKIAENADISKASAGRALDAFIDSVSDTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAQVPAFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaacacaactagtagaaaaaattgcagagaacgcagacatctctaaagcttca
gctggtcgcgctctagatgctttcattgactcagtgagcgacactttacaatctggtgat
caagtggctttagttggcttcggtactttcagtgttcgtactcgtgcagctcgcacaggt
cgtaaccctaagactggcgaagaaatccaaatcgctgaagcgcaagtacctgcatttaaa
gctggtaaagcacttaaagacgcttgtaactaa
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