Vagococcus teuberi: BHY08_09135
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Entry
BHY08_09135 CDS
T04578
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
vte
Vagococcus teuberi
Pathway
vte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BHY08_09135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vte03021
]
BHY08_09135
03400 DNA repair and recombination proteins [BR:
vte03400
]
BHY08_09135
Enzymes [BR:
vte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BHY08_09135
Transcription machinery [BR:
vte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BHY08_09135
DNA repair and recombination proteins [BR:
vte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BHY08_09135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
APB31959
UniProt:
A0A1J0A7S8
LinkDB
All DBs
Position
complement(1901291..1904866)
Genome browser
AA seq
1191 aa
AA seq
DB search
MVGHVVKYGKHRERRSYSRISEVLELPNLIEIQTDSYKWFLDEGLREMFEDIMPITDFSD
KLSLEFVDYEMKEPKYTVEEARAHDANYSAPIHVTLRLDNQVTGEIKSQEVFFGDFPLMT
EMGTFIINGAERVVVSQLVRSPGVYFNEKKEKNGHEGFGTTVIPNRGAWLELETDAKNLS
YARIDRTRKIPLTVLVRALGFGSDTTITEIFGESESLQLTIEKDIHKNSSDSRTEEALKD
VYERLRPGEPKTAESSRNLLNSRFFDPKRYDLAAVGRYKVNKKLSLKTRLLNQTLAETLV
DPETGEILVEKGTVITHTVMDELEKHLDNGLNNETYYPSEDGVVTEPMTVQVIKVVSPKD
PERVVNVIGNGQLDADVRTIRPADIVATISYFLNLMEDIGKVDDIDHLGNRRIRSVGELL
QNQFRIGLSRMERVVRERMSIQDTETLTPQQLINIRPVVASMKEFFGSSQLSQFMDQTNP
LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAK
VNKYGFIETPYRRVDRETKRVTEHIDYLTADEEDHYMVAQANSPLNEDGTFAEDLVMARI
QSENLEVSVDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIQPRSP
LVGTGMEYKAAHDSGAALLCKHDGVVEYVDAREVRVRRNDGALDKYNVIKFHRSNAGTSY
NQRPIVRKGEIVEKGDTLADGSSMEEGEMALGQNVLVAFMTWEGYNYEDAIIMSRRLVKD
DVYTSIHIEEYESEARDTKLGPEEITRELPNVGEDALKNLDEMGIIRIGAEVKDGDLLVG
KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREGGDELSPG
VNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPVDIMLNPLGVPS
RMNIGQVLELHLGMAARSLNIHVATPVFDGANEEDVWSTVEEAGLARDAKTVLYDGRTGE
PFDNRISVGVMYMLKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVKTYESIVKGEPIQKPGVPESFRVLVKELQALGLDMRV
LDADDQEIELRDMDDEDDDLITVDALAKYAKEQEEKALAEKSLKDAQENQE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
ttggttggacacgtagtgaaatacggaaaacaccgagaaagacgtagctattctaggatt
agtgaagtactagaattgccaaacttaattgaaattcaaactgattcttataagtggttt
ttagatgaaggtttacgcgaaatgtttgaggacattatgccaattacagattttagcgat
aaattatcattagaatttgtcgattacgaaatgaaagaaccaaagtatacagttgaggaa
gctcgcgcacatgatgctaactactcagctcctatccacgtaacattacgtttggataat
caagtgacaggagaaatcaagtcgcaagaagtgttctttggagatttcccactaatgaca
gagatgggaacatttattatcaatggtgctgagcgtgtagtggtatcacagttagtaaga
tcacccggagtttatttcaatgagaagaaagaaaaaaatggacatgagggatttggaaca
actgttattcctaaccgtggtgcatggttagagcttgaaacagacgcgaaaaacctttct
tatgctcgtattgatagaacaagaaaaattcctttaacagtattagttagagcattagga
tttggttcagatacgactattacagaaatttttggtgaaagcgaaagtttacaattaaca
attgaaaaagatattcataaaaattctagcgattctcgtacggaagaagcgttaaaagat
gtttatgaaagacttcgtccaggcgagccaaagactgctgaaagttcaagaaacttattg
aactctcgtttctttgatccaaaacgttacgacttagcagcagttggtcgttacaaagta
aataaaaaattaagccttaaaacacgtttgttaaaccaaacgttagctgaaacattagtt
gatcctgaaactggagaaatccttgtagaaaaaggaacagttatcacgcatacagtgatg
gatgaattagaaaaacatttagataatggtttaaacaacgaaacatactatccaagtgaa
gatggtgttgtaactgaaccaatgactgttcaagtcattaaagttgtgtcaccaaaagac
cctgaacgtgttgtaaacgtcattggtaacggtcaacttgatgcagatgtaagaacaatt
cgtcctgctgatattgtggctacgatcagttacttcttaaacttaatggaagatattgga
aaagtagacgatattgaccatttaggaaaccgtcgtattcgttcggttggtgagttatta
caaaatcaattccgtatcgggttatctcgtatggaacgtgtggttcgtgaaagaatgtct
atccaagacactgaaacactaacaccacaacaattgattaacattcgtccagttgtggca
tctatgaaagaattctttggttcttctcagttatcacaattcatggatcaaactaatcca
ttaggtgagttaacgcataaacgtcgtctatcagctttaggacctggtggtttaacacgt
gaccgtgctggatatgaagtacgtgacgtgcattactcacattatggtcgtatgtgtccg
attgaaacacctgagggaccaaacatcgggttaatcaatagtttatcaagttatgcgaaa
gtaaataaatatggtttcatcgaaacaccatatcgtcgtgttgaccgtgaaacaaaacgt
gttacagaacatattgattacttaacagctgacgaggaagaccattacatggtagcgcaa
gcgaactctccattaaatgaagatggtacgtttgcagaagacttagttatggctcgtatt
caaagtgagaacttagaagtatcagttgataaagttgactacatggacgtttcacctaaa
caagtagttgcggtagcgacagcatgtattcctttcttggaaaacgatgactctaaccgt
gcacttatgggagcgaacatgcaacgtcaggcagtacctctgattcaaccacgttctcca
cttgttggaactggtatggaatacaaagctgcccatgactcaggagcagcacttttatgt
aaacatgatggtgtcgttgaatacgttgatgcacgtgaagtacgtgttcgtcgtaatgac
ggtgctttagataaatataatgtgattaaattccaccgttcaaatgctggtacaagttat
aaccaacgccctatcgttagaaaaggtgaaatcgttgaaaaaggcgatacactagctgac
ggttcttctatggaagaaggggaaatggcattaggacaaaacgttttagtagcattcatg
acttgggaaggttacaactatgaagatgcgattattatgagtcgccgattagttaaagat
gatgtgtacacatctattcatattgaagaatacgaatcagaagcacgtgacacaaaatta
gggcctgaagaaattactcgtgagttaccaaacgttggggaagatgcacttaaaaactta
gacgaaatgggtattatccgtatcggtgctgaagtaaaagatggtgatttacttgttggt
aaagtcactcctaaaggggtaacagaattatcagcagaagaacgtctattacatgcaatc
ttcggagaaaaagctcgtgaagttcgtgacacctctctacgtgttccacatggtggaggc
ggtattgttcatgatgttaaaatctttactcgtgaaggcggagatgagttatctccaggt
gttaacatgttagttcgtgtgtacatcgttcaaaaacgtaaaattcatgaaggagataag
atggccggtcgtcatggtaataaaggggtagtatctcgtattatgccagaagaagatatg
ccattcttaccagatggtacaccagttgatatcatgttaaacccattaggggtaccttct
cgtatgaacattggacaagtattagagttgcatttaggtatggctgctcgctcgttaaac
atccatgttgcaacaccagtatttgatggggcaaatgaagaagatgtatggagtactgtt
gaagaagcaggacttgctcgcgacgctaagactgttctttatgatggacgtacaggtgaa
ccatttgataaccgtatttctgtaggtgtaatgtacatgctgaaacttgctcacatggtt
gacgataagttacatgctcgttctattggaccttactcactagttacacaacaaccactt
ggtggtaaagcacaatttggtggacaacgttttggagagatggaagtttgggctcttgaa
gcatacggagcagcttacactttacaagaaatcttgacttataaatcagatgacgttgta
ggtcgtgtgaaaacttacgaatctatcgttaaaggtgaaccaattcaaaaaccaggtgtt
cctgaatcattccgcgtacttgttaaagagttacaagctttaggattagacatgcgagta
ttagatgcagacgatcaagagattgaattacgtgatatggatgatgaggacgatgatttg
attactgttgatgccttagcaaaatatgctaaagagcaagaagaaaaagcattagcagaa
aaatcgttgaaagatgcacaagaaaaccaagaataa
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integrated database retrieval system
