KEGG   Vibrio tubiashii: IX91_02205
Entry
IX91_02205        CDS       T03445                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vtu  Vibrio tubiashii
Pathway
vtu02024  Quorum sensing
vtu03060  Protein export
vtu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vtu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    IX91_02205
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IX91_02205
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IX91_02205
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vtu02044]
    IX91_02205
Enzymes [BR:vtu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     IX91_02205
Secretion system [BR:vtu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   IX91_02205
  Eukaryotic Sec-SRP protein
   IX91_02205
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_30 KTI12 T2SSE AAA_31 AAA_26 AAA_33 Mg_chelatase AAA_19 APS_kinase ABC_tran AAA_16 AAA_24 ATP_bind_1 Helicase_RecD VirC1 AAA_14 Rad17 YqeC KAP_NTPase Thymidylate_kin
Other DBs
NCBI-ProteinID: AIW13025
UniProt: F9SZP0
LinkDB
Position
1:430433..431821
AA seq 462 aa
MFENLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVREFIKRIKESAV
GVEVSKSLTPGQEFIKIVQAELEAVMGESNEALNLAAQPPAVVLMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLASDVGVDFFPSSADQKPIDIANAAIDHAK
KKFYDVLLVDTAGRLAVDEQMMAEIQELHTAINPVETLFVVDAMTGQDAANTAKAFGDTL
PLTGVVLTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQRNVDQDKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMMDKLPGMSNL
PDNVKDKVDDKMFKQMEAIINSMTMKERQRPELIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGMGGGGFNPFGR
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgtttgagaatttaacggatcgcttatccaaaacgctgaaaaacatcagcggtaaaggt
cgtctgaccgaagacaatattaaagagacgttgcgtgaagtgcgtatggcgcttcttgaa
gctgacgttgctcttccggttgtacgtgaatttattaagcgtattaaagagagcgccgtt
ggggtagaggtttcgaaatctctcacaccaggccaagagttcattaagatcgttcaagct
gagcttgaagcggtgatgggtgagtccaatgaagcgcttaacctagctgctcagccacct
gctgttgtattaatggctggtctgcagggtgcaggtaaaacgacttctgttggtaagctt
tcaaagctattaaaagagcgcgataagaagaaagtgctggttgtatctgccgacgtttac
cgtcctgcggcgatcaaacagctagaaacattggcttcagatgtgggtgttgatttcttc
ccatcttcagctgatcaaaagccgattgatatcgctaatgctgccatcgaccacgcgaag
aagaaattctacgacgtacttcttgtcgatacggcgggtcgtttagcggttgatgagcag
atgatggctgagattcaagagctgcatactgcgattaaccctgttgagactctgtttgtt
gtcgatgcgatgacaggtcaagatgcggcgaacacagccaaagctttcggtgatacgctg
cctctaacgggtgtggttctgaccaaagtagatggtgatgcacgtggtggtgcagcgctg
tctgttcgtcatatcactggcaaaccaatcaaattcctcggtgttggtgagaaaaccgac
gcactagaacctttccacccggatcgtgtcgcatctcgtattcttggtatgggtgacgtc
ctgtcgcttatcgaagatctacaacgtaatgttgaccaagataaagcagagaagctggct
aagaagtttaaagagaagaaaggttttgaccttgaagacttccgtgaacagcttggtcag
atgcaaaacatgggcggcatgatggggatgatggacaagctaccaggcatgagcaattta
ccggacaacgtgaaagacaaagttgacgataagatgttcaagcagatggaagcgatcatc
aactcaatgacgatgaaagagcgtcagcgccctgagctcattaaaggctcgcgtaagaaa
cgtattgccgcaggctctggtacccaagtacaagacgttaaccgcctgcttaaacagttc
actcagatgcagaagatgatgaagaaaatgcagaaaggtggcatgaaaggcatgatgcgt
aacatgcaaggcatgatgggtggtatgggcggaatgggaggcggtggcttcaatccattt
ggacgctaa

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