Vibrio tubiashii: IX91_04705
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Entry
IX91_04705 CDS
T03445
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
vtu
Vibrio tubiashii
Pathway
vtu02020
Two-component system
vtu02040
Flagellar assembly
vtu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IX91_04705
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IX91_04705
09142 Cell motility
02040 Flagellar assembly
IX91_04705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vtu03021
]
IX91_04705
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vtu02035
]
IX91_04705
Transcription machinery [BR:
vtu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IX91_04705
Bacterial motility proteins [BR:
vtu02035
]
Flagellar system
Flagellar assembly proteins
Stator
IX91_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
UPF0122
GerE
Rv2175c_wHTH
UPF0175
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AIW13504
UniProt:
F9TCY8
LinkDB
All DBs
Position
1:1002850..1003584
Genome browser
AA seq
244 aa
AA seq
DB search
MNKALTYEQYANQDSQRAFLEKYSVLVKRIAHHLLGRLPPSVQVEDLIQAGMIGLLEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKHNREVSQAISTLEGLLNRDPTD
AEVAQHLGISLDQYHTILTDINCSRLVGIEDLGVSEDAISPEDTDKENLPFQGVADEFFR
KALVDSIKSLPEREALVLSLYYDEELNLKEIGEVIGVSESRVSQILSQSMQRLRTKLSAW
TNNE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggctttgacctatgaacagtatgcaaatcaagatagccaacgagcattttta
gagaaatactcggtgttggtgaagcgtattgctcaccatttgctaggacgtctgccgcca
agtgtccaagtagaagatcttattcaagcgggcatgattggattgctcgaagcgcaaaaa
aactacgatggtagcaaaggcgcaagtttcgaaacgtatgctggcattcgcatccgaggt
gctatgcttgacgatatacgtcgaggtgattgggtacctcgttctgtacataaacataat
cgtgaggttagtcaggcaatatctactctagaaggtttactgaatagagatccaactgat
gcagaggttgcacagcatttggggattagcctagaccaataccatacaattttaacggat
attaactgctctcgtttggtcggaatcgaagatctgggtgtttcagaagatgcaatttca
cccgaagataccgacaaagagaaccttccattccaaggtgtagcagatgagtttttccga
aaagcgctagtagattcaattaaatcgcttccagaacgtgaagctctagtactttcgctt
tattatgatgaagagttaaacttaaaagaaatcggtgaggtgattggtgttagcgagtca
cgcgttagccaaatactaagccagtcaatgcagcgtctacgcacaaagttaagtgcttgg
acaaataatgagtaa
DBGET
integrated database retrieval system
