Vigna umbellata (ricebean): 124848325
Help
Entry
124848325 CDS
T09662
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124848325
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vum01009
]
124848325
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vum03041
]
124848325
Protein phosphatases and associated proteins [BR:
vum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124848325
Spliceosome [BR:
vum03041
]
Common components
Common spliceosomal components
SR proteins
124848325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124848325
NCBI-ProteinID:
XP_047181931
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MNRRSIRCSAIDKTKPLAFVVSFLILLHLGSRGLRLKDLVEMADSPPRRNSRSPSPWRAQ
SRSRSRSRPRSRSRSRSFEKQRPRSRSRSRGRSRSRSNDRMETKNTGNTLYVTGLSSRVT
ERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDNVEDANRCIKYLNQSVLEGRYIT
VERSRRKRARTPTPGHYLGLKSTRDYGYRGDRGRYRGGGSGRDDYAYRGERGRSPRRSPY
RGGRDYSPRHSPPPYGGRTRRDRSRSLPYSPYGSPDRRYARGSR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaaggtcaattcgttgctctgcgattgacaaaacaaaacccttagccttcgtg
gtctctttcttgattcttcttcatctcggttcaagaggtctacgcttgaaagatctcgtt
gaaatggccgattctccgccaagaaggaattcaaggtccccttccccatggagggctcag
tcaagatctaggtctagatctaggccaaggtctaggtcccggtcaagatcatttgaaaaa
caaaggccaaggtctcgctccagaagtcgtggaagatcaagatcaagaagtaatgacagg
atggagactaaaaatacagggaatacactttacgtcactggcctatcttcaagggtcact
gagagagacctggaggagcatttctctaaagagggaaaggttgcttcgtgttttcttgtg
gtggagccccgtactcgcatttctcgaggtttcgcttttattacaatggataatgttgag
gatgcaaaccgctgcatcaaatatctcaatcaatcagttttagagggtcgctatatcact
gttgagcggtcacgaagaaagcgtgcaagaactcctacacctggacactatcttggtctg
aaaagtactcgagactatggatatcgcggtgaccgcggaaggtatagaggaggtggatct
ggccgtgatgattatgcatatcgaggagagcgtggaaggtctccgaggcgctcaccttat
cgaggtggtagagattattctccgaggcattcaccgccaccttatggcggaagaactagg
agggataggtccaggtcacttccatactctccatatggtagcccagacaggaggtatgct
cgtggatctaggtga
DBGET
integrated database retrieval system
