Vigna unguiculata (cowpea): 114167055
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Entry
114167055 CDS
T06017
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC114167055
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114167055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114167055
03400 DNA repair and recombination proteins [BR:
vun03400
]
114167055
Enzymes [BR:
vun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114167055
Transcription machinery [BR:
vun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
114167055
DNA repair and recombination proteins [BR:
vun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
114167055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
114167055
NCBI-ProteinID:
XP_027907778
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All DBs
Position
10:29513576..29516589
Genome browser
AA seq
684 aa
AA seq
DB search
MIDQYKHQQLRIGSVSPQQISAWAKXILPNGEIVGEVKKPYTFHYKTNKPEKDGLFCERX
FGPIKSGICACGNYRVIRDKKDDPKFCEQCGVEFIDSRIRRYQMGYIKLACVVTHAWYLK
RLPSYIANLLDKPLKELESLVYGDFSFARPVVKKPTFLRLRGSFEYEIQSWKHSIPLFFT
TRGFDIFRNREISSGAVAIREQLADLDLRIIMDYSLIEWKELGKEGSPDNENEWEDRKVG
RRKNFLVRRIELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRR
VIYRNNTLIDLLTTSRSTPGELVICQEKLVQAAVDTLLDNGIRGQPMRDGHNKVYKSFSD
IIEGKEGRFRETLLGKRVDYSGRSVIIVGPSLSLHRCGLPGEIAIELFQTFLIRDLIRKH
FASNIGIAKSKIRQKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICL
HPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIADPISVPTQDMLIG
LYILTNGNRRGISSNRYNPRNCRNLKNERIPQKNYKYTKKKEPFFWNSYDAIGAYQQKRI
TFDSPLWLRWRLDLRIISSREVPIEVHYESLGTYHEIYGHYLVVRSTKKQIRSIYIRTNV
GHISFYREIEEAVQGFCRAYSYGI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcagtataaacatcaacaactccgaattggatcagtttctcctcaacaaata
agtgcttgggcaaaangaatcttacctaatggagagatagtgggggaggtaaaaaaaccc
tatacttttcattataaaaccaataaacctgaaaaagatggattattttgtgaaaganat
tttgggcctatcaaaagtgggatttgtgcttgtggaaattatcgagtaatcagagataaa
aaggacgacccaaaattttgtgaacaatgcggagtagaatttatagattctcgaatacgt
agatatcaaatgggctatataaaactggcatgtgtagtaactcatgcgtggtatttgaaa
cgtcttcctagttatatcgcaaatcttttagataaacctctaaaagaattagaaagtcta
gtatacggcgatttttcgtttgctagacccgtagttaaaaaacccactttcttacgatta
cgaggttcattcgaatatgaaatccaatcttggaaacacagcataccacttttttttact
acccgaggttttgatatatttcgaaatcgagaaatttcaagcggagctgttgctatccga
gaacaattagccgatctggatttgagaattattatggattattcgttgatagaatggaaa
gaattagggaaagagggatccccggacaatgaaaacgaatgggaagatcgaaaagttgga
agaagaaagaattttttggttcggcgtatagaattagctaagcattttatacgaacaaat
atagaaccagaatggatggttttatgtctcttaccagttcttcctcccgaattgagaccg
attattcaaatagatgggggcaaattaatgagctcagatattaatgaactatatagaaga
gttatctatcggaataatactcttatcgatctattaacaacaagtagatctactccagga
gaattagtaatatgtcaggagaaattggtacaagcagccgtggatacacttcttgataat
ggaatccgcggacaaccgatgagggacggtcataataaggtttacaaatctttttctgat
ataatcgagggtaaagagggaagatttcgcgagaccctacttgggaaacgggttgattat
tcaggtcgttctgtcattattgtaggtccatcactttcattacatagatgtggattgccc
ggcgaaatagcaatagaacttttccagacatttctaattcgtgatctaattcgaaaacat
tttgcttccaacataggaattgctaagagtaaaattcggcaaaaagaaccgattgtatgg
gaaatacttcaagaagttatgcagggacatcccgtattgctaaatagagcacctactctg
catagattaggtatacaggcattccaacccattttagtagaggggcgtgctatttgtttg
catccattagtttgtaagggattcaatgcagactttgatggcgatcaaatggctgttcat
gtgcctttatccttagaagctcaagcagaagcacgtttacttatgttttctcatacaaac
ctcttgtctccagctatcgcggatccaatttctgtaccaactcaagatatgcttattgga
ctttacatattaacgaatgggaatcgtcggggtatttcttcaaataggtataatccacgt
aattgcagaaatttgaaaaatgaaagaattccccaaaaaaactataagtatacgaaaaaa
aaagaaccttttttttggaattcctatgatgcaattggagcttatcaacagaaaagaata
accttcgatagtcctttgtggctccggtggcgactagatctacgcattatttcgtcaaga
gaagttcctatcgaagttcactatgaatctttaggcacctatcatgaaatttatgggcat
tatctagtagtaagaagtacaaaaaaacaaattcgttctatttacattcgaaccaacgta
ggtcatatttctttttatcgagaaatcgaagaagctgtacaaggtttttgccgagcctat
tcatatggtatctaa
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