Vigna unguiculata (cowpea): 114168408
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Entry
114168408 CDS
T06017
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun00040
Pentose and glucuronate interconversions
vun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114168408
Enzymes [BR:
vun01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114168408
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
114168408
NCBI-ProteinID:
XP_027909005
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Position
11:complement(30008005..30009498)
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AA seq
390 aa
AA seq
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MISYNINFNYWHFSLAVVVVVFIPNLGVAKQSKIDGLKMNVINRCWRLNPEWRMNRPQLA
TCSIGYTGKMTNNTGKDLVHYKVMDPSDDPISPKPGTLRYGASVIQHKVWITFQKDMHIK
LKRPLLISSFTTIDGRGVNIDIAENACLMIFKATNVIIHNIRLHHCKPQAPGVVMGPEGK
VIPLGHVDGDAIRLVTASKIWIDHNTLYNCQDGLLDVTRGSTDVTISNNWFRNQDKVMLL
GHDDGYIRDQNMKVTVVYNHFGPNCNQRMPRIRHGYAHVVNNLYLGWVQYAIGGSMRPSL
KSEANLFIAPTKGSKEVTWRKNSHADGDAWEFYSVKDAFENGASFTMTKGGQVPKPNYNE
EQRFNVVNVKYVRLLTRSSGVLRCTKTGLC
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatatcttacaatatcaattttaattattggcatttttctttagctgttgttgttgtt
gtcttcatcccaaaccttggtgttgcaaaacaatctaaaatagatggattgaaaatgaat
gtgattaatcgatgttggagattgaatcctgaatggaggatgaaccgacctcaactagca
acatgttctattggctacactggtaagatgacaaacaacactggtaaagacctcgtccat
tataaagttatggaccctagtgatgatcctataagccctaaacctggtaccttgaggtat
ggagcttctgtaattcaacataaagtgtggatcacattccaaaaagacatgcatattaaa
ctcaaaagaccccttctaattagtagttttacaaccattgatggtcgaggcgttaatatt
gacattgctgaaaatgcatgtttaatgatctttaaggccacaaatgtaatcatccataac
attcggcttcatcattgcaagcctcaagctccaggagttgtgatgggaccagaaggaaag
gtgattcccttgggtcatgtagatggagatgcaataagattggttactgcttcaaagatt
tggattgatcataatacactttataattgccaagatggcttacttgatgtaacacggggt
tcaactgatgtgactatatctaataattggtttagaaaccaagacaaagttatgcttctt
ggacatgatgatggttatataagagaccaaaacatgaaggttaccgttgtatacaaccat
tttggacctaattgtaatcaacgcatgcccaggattcgtcatgggtatgcacatgtagtt
aacaatctttacttaggatgggtgcaatatgccattggtggaagtatgagacctagtctc
aaaagtgaagctaatctctttatagcaccaacaaaaggaagtaaggaggtaacatggaga
aaaaatagtcatgcagatggagatgcatgggagttttattcagtgaaagacgcatttgag
aatggagcttctttcacaatgacaaaaggagggcaggtgccaaaaccaaactataatgag
gaacaacgttttaatgttgttaatgtcaagtatgtgagattattaactcgttcatcaggt
gtattacgatgcactaaaacaggtctatgttaa
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