Vigna unguiculata (cowpea): 114193019
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Entry
114193019 CDS
T06017
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114193019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114193019
Spliceosome [BR:
vun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114193019
Complex C
U5 SnRNP specific factors
114193019
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GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Nup160
RMC1_N
Nbas_N
Motif
Other DBs
NCBI-GeneID:
114193019
NCBI-ProteinID:
XP_027938513
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All DBs
Position
1:25137203..25140496
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AA seq
345 aa
AA seq
DB search
MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT
MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIISASPDK
TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP
DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLL
TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI
WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtttttccaagtgaaggtgaaagtgctctgtcagttgttggtccaaggccaatg
gaatggtctactgttccatataatgcccctcaagctcctgggccaaatggaaagcagcgg
acctcaagtttggaatcaccaatcatgttgctgtcaggtcaccagagtgctatatatacc
atgaagttcaatccagcaggatcagttgttgcatctggatctcatgacagggaaattttc
ctctggaatgtgcatggggattgcaagaacttcatggttctgaaaggtcacaagaatgca
gttttagatcttcactggactactgatgggacacagataatttctgccagccctgataaa
acagtgagggcatgggatgtggaaacaggaaaacaaataaagaaaatggtagaacatctc
tcatacgttaattcatgttgtccttctcgaaggggaccacctcttgttgttagtggctcc
gatgatggaactgctaaattatgggatatgcgtcaaaggggttccatccaaacattcccg
gataaataccagattactgctgttgggttctctgatgcatcagataagatcttcaccggt
ggtattgataatgatgtcaagatttgggatttgcgtaaaggtgaagttaccatgacattg
caaggtcatcaagatatgattactggtatgcagttgagtcctgatgggtcataccttctt
acaaacggcatggattgcaagctttgcatttgggacatgcgcccatatgctccacaaaat
cgctgtgtgaaggtgttggaagggcaccaacacaactttgagaagaacttgttgaagtgt
ggttggtctcctgatggaagcaaggtaacagctggtagttctgatcgaatggtttacatc
tgggataccacttctcgtcgcatcttgtataagcttcctggtcacaatgggtctgttaat
gagtgtgtttttcatcccaatgagcctattattggatcttgcagcagtgacaagcagatt
tatctgggggagatatga
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