Vigna unguiculata (cowpea): 114194623
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Entry
114194623 CDS
T06017
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114194623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114194623
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114194623
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
114194623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114194623
NCBI-ProteinID:
XP_027940768
LinkDB
All DBs
Position
8:37908888..37912354
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AA seq
286 aa
AA seq
DB search
MVGLSLGEKHFIQGGIAHDLRCDGRKRLTYRPILVETGVIAQANGSARVRMGATDVIASI
KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQHCLLGGKSGAGA
GIDLSSLIVVEGKICWDLYIDGLVVSSDGNVLDALGAAIKAALCNTGIPRVQVAAGTSND
EQPEVDVSDEEFLQFDTSGVPVIVTLTKIGRHYIVDATSEEESQMSSAVSISVNRQGHIC
GITKRGGVGLDPSIILDMISVAKHVSEQLMNKLDSEIASAEAEEES
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtttatctcttggagaaaaacatttcatacaaggtggcattgctcatgatctt
cgatgtgatggtagaaagaggttgacatatcgaccaatcttggttgaaactggagtgatt
gcccaggcaaatggttcagctcgagtcagaatgggtgccacagatgtcattgccagtatt
aaggctgaacttggaaagccaagcttgttgcaacctgacaaaggaaaagtctctatatat
attgattgcagttcgactgcagagcctgcatttgagggtagaggaggtgatgagttggca
gcagaactgtcaaatgctcttcaacactgtctcttgggtggtaaaagtggagcaggtgcc
ggaattgacctttcatcacttattgtcgtcgaaggaaaaatttgttgggatctttacatt
gatgggcttgttgttagttcagatggaaatgtgttggatgctctaggcgctgccattaag
gctgctttgtgcaatacaggtattccaagagttcaagttgctgctggaacatcaaatgac
gagcaaccagaagttgatgtaagcgatgaggagtttctgcagtttgacacatctggagtc
cctgtcatagttacactaactaagattgggaggcactatattgtggatgcaacatcagaa
gaggagtcacaaatgagctctgctgtttccatctctgttaataggcaagggcacatctgt
ggcataaccaaacgaggaggtgtagggctggatccaagcatcattcttgatatgatatcc
gttgctaagcatgtgagcgagcaattaatgaacaaattggattcagaaattgcttctgct
gaagctgaagaggagtcatga
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