Vigna unguiculata (cowpea): 13080458
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Entry
13080458 CDS
T06017
Symbol
rpoA, A564_p033
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
13080458 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
13080458 (rpoA)
03400 DNA repair and recombination proteins [BR:
vun03400
]
13080458 (rpoA)
Enzymes [BR:
vun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
13080458 (rpoA)
Transcription machinery [BR:
vun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
13080458 (rpoA)
DNA repair and recombination proteins [BR:
vun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
13080458 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
13080458
NCBI-ProteinID:
YP_006460374
UniProt:
I2E2S2
LinkDB
All DBs
Position
Pltd:complement(78007..79008)
Genome browser
AA seq
333 aa
AA seq
DB search
MVQEKLRVSTRTLQWKCVESRIDSKRLYYGRFILSPLMKGQADTIGIAIRRILLGEIEGT
CITRVKSEKIPHEYSTIIGIEESVHEIFMNLKKIVLKSNMYGTQDAWISFKGPGYITAQD
IILPPSVEIVDNRQHIANVTEPVNLCIELKIERNRGYRIKTLKNFQDGSYDIDARFMPVR
NVNYSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASQNLIDLFLPFLHAEEDNFHLE
KNQDKVTLPLFTFHDILVKDKLRKNKKEIALKSIFIDQLELPPRIYNCLKRSNIHTLLEL
LNNSQEDLLKFEHFRVEDGKSILDILKIQKYFA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggttcaagagaaattaagagtctctactcggacactacaatggaaatgtgttgaatca
cgaatagacagtaagcgtctttattatggacgctttattctgtccccacttatgaaaggt
caagccgatacaataggcattgcaatccgaagaattttactcggagaaatagagggaaca
tgtatcacacgtgtaaaatcagagaaaataccacatgaatattctaccataataggtatt
gaagaatcagtacatgaaattttcatgaatttgaaaaaaattgtattgaaaagtaatatg
tatggaacacaggacgcatggatttctttcaaaggtcctggatatataaccgctcaagac
atcattttaccaccctcggtggaaatcgttgataatagacaacatatagccaacgtaaca
gaacctgttaatttgtgtattgaattaaaaattgagagaaatcgtgggtatcggataaaa
acattaaaaaactttcaagacggaagttatgatatagatgctagattcatgcctgttcga
aatgtaaattatagtattcattcttatgtcaatgggaatgaaaaacaagaaatacttttt
ctggagatatggacaaacggaagtttaactcctaaggaagccctttatgaagcctcccaa
aatttgattgatttatttcttccctttttacacgcagaagaagataactttcatttagaa
aaaaatcaagacaaagtgactttgcccctttttacttttcatgatatattggttaaagat
aaactaaggaaaaataaaaaagaaatagcattgaaatctatttttattgaccaattagaa
ttacctcccaggatctataattgtctcaaaagatccaatattcatacattattagaactt
ttgaataacagtcaagaagaccttctgaaatttgaacattttcgcgtagaagatggaaaa
tctatattggacattttaaaaatacaaaagtattttgcataa
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