Vespa velutina (Asian hornet): 124956819
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Entry
124956819 CDS
T09814
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124956819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124956819
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124956819
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124956819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
124956819
NCBI-ProteinID:
XP_047369072
LinkDB
All DBs
Position
23:3232934..3243678
Genome browser
AA seq
2402 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLTKKNFRDSCKEISILVQWKGLEADRHLLRSLLSYVDFSTG
EPPESSAKDYFQVQLLKQECTNLLSKPSLISNFCFAIDHPLHHQKTLNSSPKFFLHLKKV
LGLTLVQEVAFAIVLQHSENIDIRALAHEHIKKQLPELIKNYINSETSNKHHEEGLHDSS
PEVLHLILSQVFHIPNQFGVSSEAKEKFLKNLRRDFPRELVPVVLAPLLYPGDGETPQAK
IELNMAVNQMDGNSLVELIMELGYGFTSSVEECRSALAGLGAREISPACVARVLAHMARS
CNSLDDAGGLQSFWGNSASTQDANKEKTSESIAPTTWNVEVFVQALKEIQSTLLWNEVIV
KLDHAEFIIKDRQGLNLLIMGLRLGLQHQGYPPDVFPVELFYRHWENVEGQFSLVQQILK
CPDIFCFADYPYHSVTVDVLKAAPEGDSKEAQTWRSLYVVELLLHMAERGLYGPVQEIFK
WPIQHCPDVLVLALLQINPPITLLRQELLSTLMPIFLGNHPNSAVILHHAWHANNVKIKS
IIMHAMAEWYIRGDHDQTRLSRILDVAQDLKALSALLNAQSFPFVIDLACLASRREYLKL
EKWLTDKIRDHGEVFVAACVKFLHRRCPQVMGPGIKEDPTVPKASQLPQETLTTILACLQ
VCAGSVSQECSEAIMTMVQNCSLMLNKTTMSRPPPPGVLRHRGLEPFNPATLGGQLFSSK
QVDPLGNLSSSLASMGLGSSLGPPSSSAFNLPGALGPLVSAPGSPSRLTGPSPSPFPMLP
LSSQLHSGPVGTQGPSVLPGSTIGGLGRLGPPTGIEKARIPETSNLFPDMPQNVSKEIED
EANSYFQCIYNHPPHPTLSIDEVLDMLKKFQDSGNKREREVFNCMLRNLFEEYRFFPQYP
DKELQITAQLFGGIIERGLVNSYMTLGLALRFVLDALRKPDGSKMYYFGITALDRFKSRL
KDYQTYCEHVRNIQHFSEFPPHLIEYIEYGLQGQEPPTRPQGPVLPKTLAAMLAPVTTPY
KTITTTTITTSTTQAKPSTTPTTSLSARPSIANATNIDTLLVATDKEEKITTPPEALQDK
TAFIFNNLSQLNLQQKCDEIREIVTEDYWPWMAQYLVMKRASIELNFHALYSNFLDCLKL
PEVNKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQVDIDLK
SLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKLN
LKFEIEVLCKNLSIDVGELKPAVYLKDPEKLRNLDYQLSHPNKKTEAGNNQQQTQAPIEE
LVGPTTTGTIVAQSAPPANTTPSLPTGPPEPRFSYMDISVTGITNISQHITINNQLPLFQ
THPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTAARHM
VRNLTAGMAMITCRDQILASISTNLKQAFLTAMMGTTPQQKELAEQAATVVAADNMELAC
AFVQKTAVEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGIT
PQQMAVYEEFARNIPGFLPLSERDTQALFVPKPVTETAVVPFATNPAVAVATAQQVAAYA
AAVSNDEVGAMLEKLAAEVDVLLSAMGPAAPPPQHVALHSLLESIILTRRSRDAGAAMTL
LKKAVEGLLDGPTISSGVTDSEIVLRYRELHLRILKCLQDPRAYGMQWTNKHVTRFLTEC
REDFRYNFEAVDCLIRSHLISLPQYDLALAQAMDASNAMATAFAMQLVQLYLIDERQTTH
VTESDLFHTIEILVRIAHHRAPPEGIPLFRLTSLIESLRANHDPAVLADRAPAGPTAHIH
SGILQVRARDFDDPPGLMEKTEYLLREWVSMHHSPTHARDPTKAFGMFVHQMNIHGILKT
DDLITRFFKLSTQMCVDLCYRALAETNAVPSVVRAKCFHSLDAFVRLVALLVKHSGDTTN
THTKINLLNKVLGIVAGVLLQDHEMRGTDFQQLPYHRIFIMLFLELCAPEPVLEAVNYQV
LTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYL
APYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSA
FPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPVTFLS
ELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAFIRSKGHTPNMSTIAHSAHMDIFQNL
AVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIV
NRPHPWGLLITFIELIKNPTYKFWTHEFVHCAPEIEKLFESVARSCMVQKQVQPTPEPEI
PE
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttacttggttgctaatttg
actaagaaaaattttcgggacagctgcaaagaaatatcaattttggtacagtggaaaggt
ctggaggcagaccgacatttgctgcgctctttgctctcttacgtcgatttctcaaccgga
gagccaccagaatcaagtgctaaggattattttcaagtacagcttctaaagcaagagtgt
accaatctgctcagcaagccttctctgatttctaacttctgttttgcaatagatcatcct
ttacatcatcagaagactttgaattcatcgccaaagttttttttacatctgaagaaggta
cttgggctgacgctagtacaggaagttgcttttgcgattgtactacaacattctgaaaat
atcgatattcgtgcattggctcacgagcacattaaaaaacaactacctgaattaataaaa
aattatattaattcggagacaagcaataagcatcacgaggaaggcttacacgattcgtcg
ccagaagttttgcatcttatactttcacaggtttttcatattcctaatcaatttggtgtt
tcttccgaagcaaaggaaaaatttctcaagaatttaaggcgcgattttccccgtgaactg
gtaccagtggtgctagcaccactcttgtatccaggcgacggggaaactccgcaagccaaa
attgaattaaacatggctgtcaatcaaatggatggcaattcattagtggagttgatcatg
gaattaggatacggatttactagtagcgtagaagaatgtagatcggcattagctggttta
ggggctagagaaatatctccagcatgcgttgctcgagttttagctcatatggcacgcagt
tgtaatagtcttgatgatgctggaggcttacaatcattttgggggaactctgcttctact
caagatgctaataaagaaaaaacttcagaaagtattgctcccacaacttggaacgttgaa
gtttttgttcaagctttaaaggaaatacaatcaacattattgtggaatgaggtgatcgtg
aaattggaccatgctgagtttatcattaaagatagacaaggattaaatttgctaatcatg
ggcttaagattaggtttgcaacatcaagggtatcctccagatgtgttccctgttgaactt
ttttatcgacattgggaaaatgtagagggtcaattttctttagtacaacaaattttgaag
tgtcctgacatattttgttttgctgattatccataccattcggttactgttgatgtattg
aaagcagctcctgaaggagatagtaaggaagcacaaacatggagatctttgtatgtcgtt
gaactgcttctacatatggctgagaggggtttatatggaccagttcaagaaatatttaaa
tggcctattcaacattgtccagacgtacttgtcttagctttattacaaattaatccgcct
ataactttacttaggcaagaattactcagtacacttatgcccatctttcttgggaatcat
ccaaattctgcagtgattttacatcatgcgtggcatgcaaataatgttaaaataaaatcc
attattatgcatgcaatggctgaatggtacatacgtggtgaccatgatcagacaagattg
tctcgcattttagatgttgcacaagatcttaaagcattatcagcattattgaacgcgcaa
tcttttccatttgtcattgatctagcatgtctagcatctcgacgagaatatttgaaatta
gaaaaatggttgacagataaaattagagaccatggagaagtttttgttgctgcttgtgta
aaatttttacatagacggtgtccgcaagtgatgggtcctggtataaaagaggatcctaca
gtgccaaaagcaagtcagcttccacaagaaacactcacaactattcttgcttgtttgcaa
gtatgtgccgggagtgtttctcaagagtgttctgaagcaataatgacgatggtacaaaat
tgcagtttaatgttaaataaaaccactatgagtagacctccaccaccaggggttctaaga
catagaggattagaaccatttaatcctgcgacattaggagggcagttattttcttctaag
caagtagatccacttggaaatttaagttcaagtcttgcttctatgggtttaggatctagt
cttggaccacctagtagttctgcatttaatttgccaggagcattaggacccttagtttca
gcacctggatctccttctagattaacaggaccttctccaagcccatttccaatgttacca
ttatcttcacaactccattctggcccagttggaacacagggtccttctgtattacctggt
agtacaattggaggattaggacgacttggtccaccaacgggtatagaaaaagcaagaata
cctgaaacatcaaatctgtttcctgatatgccacaaaatgtatctaaagaaattgaagac
gaagcaaatagctattttcaatgtatatacaatcatccacctcatcccacattgtcaatt
gatgaagttcttgatatgctcaaaaaatttcaagattcaggaaacaaaagagaaagagag
gtattcaattgtatgcttcgaaatttattcgaagaatatcgtttttttcctcaatatcca
gataaagaactgcaaataactgcacaattatttggtgggattattgaaagaggtttggtt
aatagttacatgacacttggattggcacttagatttgttttggatgctttgagaaagcca
gatggtagtaaaatgtattactttggtataacagctttggatcgttttaaaagtcgtttg
aaagattatcaaacatattgcgaacacgtgaggaacatacagcattttagtgaatttcca
ccacatttaatagagtatatagaatatggtctacaaggacaagaacctcctactcgacct
caaggtcctgtccttccaaaaacattagctgctatgttagctccagttacaacaccatat
aaaactattacaacaacaactataacaacaagtactactcaggctaagccttccacaaca
ccaactacttcactttctgccagaccctctattgcaaatgcaactaacattgatacgttg
cttgtagcaacggataaagaggaaaaaattacgacaccgcctgaagcattacaagacaag
actgcatttattttcaacaatcttagtcaactcaatttacaacaaaaatgtgatgaaatt
cgagaaatagttactgaagattattggccttggatggcccaatatttagtgatgaaacgt
gctagcattgaattaaattttcatgccttatattctaatttccttgattgcttaaaactt
ccagaagttaataaaatggtaactagagaaacattcagaaatatcaaggtattattacgg
agtgataaaggaatagcaaatttttctgatcgatctcttttaaaaaacttggggcattgg
cttggaatgttaacccttggtagaaataaacctattttacaggtggatattgatttaaaa
agcttgttagttgaagcatatcacaaaggtcaacaagaacttctttatgttgtacctttt
gttgcaaaagtcttggaaagttgtgcgaaaagtcgtgtttttcgtcctcctaatccatgg
acaatggcaattatgaatgtgctagcagaacttcatcaagagccagacttaaaattaaat
ttaaaatttgaaattgaagtgctttgtaaaaacttaagcatcgatgttggagaattaaaa
ccagcagtttatttaaaagatcctgaaaaattacgtaacttggattatcaattgtcacat
ccaaataagaaaacagaagcaggaaataatcaacaacagacacaagcccctattgaagaa
ttagtcggacctacgacaacaggaactattgttgctcaatcagcacctcctgctaacact
acaccatctttacctactggaccaccagaaccacgttttagttatatggatatatctgtt
acaggcattaccaatatttctcaacatatcaccataaataatcaactacctttgttccaa
acgcatcctcatttaaaacaatttgttcgtcctgctgttgaaagagctatacaagaatgg
attcatccagttgttgatcgatctattaaaatagctttgactacaagtgaacaaatcgta
aggaaagactttgctttggatcctgaagaagtaaggatgcgaacagcagcacgtcatatg
gttcgtaatttaactgctggaatggctatgattacatgtagagatcagattttagcatca
ataagtacaaatttaaagcaagcttttctaacagctatgatgggtacaactcctcagcaa
aaagaattagcagagcaagctgcaactgttgtagctgccgataatatggaacttgcttgc
gcatttgtacaaaagactgctgttgaaaaagctatcccagagatggataaacgtttactc
aatgaaatagaattacgaaaaattgcacgacaagaaggaagaagatattgtgatccttta
gctaagtatcaagctgaaaggatgccagaacagattcgattaaaagtaggcgggataact
cctcaacaaatggctgtttatgaagaatttgccagaaatatacctggattcttaccatta
tccgaaagagatacacaagcactttttgtgccaaaaccagtaacggaaactgcagtagtt
ccgtttgctactaatccagccgttgcagtagcaacggctcaacaagtagctgcatatgca
gctgctgtaagtaacgatgaagtaggagcaatgttagaaaaacttgcagctgaagtagat
gtattgctttctgcaatgggtccggctgcaccacccccacaacacgtagcacttcatagt
cttttagagtctattatccttactagaagatcaagggatgcaggtgctgcaatgacgctc
ttaaaaaaagctgtagaaggattattagatggtcctactatttctagcggagtgacggat
tcggaaatcgtcttgcgttatagagaacttcatttacgcattctgaaatgtcttcaagat
ccacgtgcttatggtatgcagtggacgaacaaacatgttacccgtttcttaacagaatgt
agagaagattttcgttataattttgaagccgtagattgtttaataagatctcatttgatc
agtcttccacaatatgatttagctctagcacaagctatggatgctagtaatgctatggca
actgcatttgctatgcaattggttcaactatatctcattgatgagagacaaacgacacat
gtaacagaatctgatctgtttcatacgattgaaatacttgtaagaatagcacatcataga
gctccaccagaaggaatcccactctttagacttactagtctaatagaatcattacgtgca
aaccatgaccctgcagtattagccgatcgtgctcctgcaggaccgacagcacacatccac
tctggaattctccaggtgagagcccgtgatttcgatgatccaccaggattaatggagaag
accgaatacttattacgtgaatgggtttcaatgcatcatagtcctacccatgctcgtgat
cctactaaagcatttggaatgtttgtccatcaaatgaacattcatggcattttaaaaact
gatgacctcataactagattttttaaattaagcactcaaatgtgcgtggacctttgttat
cgcgcattggccgaaaccaatgcagttccttctgttgttcgcgcgaaatgtttccactcg
ttagacgcttttgtgcgcttagttgcgctcttagtcaaacattctggcgacacaacaaat
actcatacaaaaatcaacttattaaacaaagtacttggaatagttgctggagtgttactg
caagatcatgaaatgcgtggtacagatttccagcaattaccttatcatcgaattttcatc
atgctctttttagagctttgtgcccctgaacctgttttagaggcagtcaattatcaagtt
ttaacagccttctgtcatacgttacacatattgagacctgccaaagcttcgggcttttgt
tatgcctggttagagcttgtttcgcacagggttttcattggacgtatgctcgctattact
ccacagcaaaaatgttggggaatgtacgctcaacttctcatcgatttatttaaataccta
gcaccgtatctgcgtaatgcagaactggcaaaacccgtaactctcctatataaaggtact
cttcgggtattactggtattattacatgattttccagagtttctttgcgattatcattat
ggattttgtgacgtaattccaccaaattgtatacaaatgagaaatctcattttaagcgca
ttcccaagaaatatgcgcttacctgatccgttcactccaaatttaaaagtcgatatgctt
caagaaatcgcacacgctcctagagtgcttactaattttgcttcgatgattcaaccactc
agttttaaaaaggaattagattcttatttgaaagcccgtgctccggtcacctttttgtca
gaattacgtagtaatttacaagtctcacaggaagctggtgtaaggtataatattcaattg
atgaacgctttggttctttacgttggaacacaagctattgctttcatacgcagtaaaggt
catacacctaacatgtccacgattgcacattccgctcacatggacatatttcaaaatctt
gctgttgatctcgataccgaaggtcgttacttatttttaaatgcaattgctaatcagctt
cgctatcccaatagtcatacgcattatttcagttgtacacttctttatttatttgccgaa
gctaataccgaagctatacaggaacaaattacgagggttcttcttgaaagacttattgtc
aatagacctcatccttgggggcttcttattacattcatcgaactcattaagaatcctaca
tacaaattctggacgcacgagttcgttcattgtgctccagaaattgaaaaattgttcgag
tctgtagctcgatcatgtatggttcaaaaacaagtgcagccgacacccgaaccagagatt
ccggagtga
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integrated database retrieval system
