Vitis vinifera (wine grape): 100232902
Help
Entry
100232902 CDS
T01084
Symbol
PL1
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100232902 (PL1)
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100232902 (PL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
100232902
NCBI-ProteinID:
XP_002285639
LinkDB
All DBs
Position
5:complement(join(11940391..11940612,11940723..11940861,11940976..11941079,11941173..11941815,11943066..11943116,11943674..11943727,11944185..11944366))
Genome browser
AA seq
464 aa
AA seq
DB search
MKLFSDSLNLFSTCHPYLLLQLDPSRERAFDPMPMAGSKGWTSLCSLLLFFLFVAVMAND
RNGGTEQLQSSNNSSMAARNEHAVDDPDAVASMVDMSIRNSTERRKLGYFSCGTGNPIDD
CWRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRHAVIQD
APLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITVQFVTNVIIHGLHIHDC
KPTGNAMVRSSPSHFGWRTMADGDAISIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITI
SNNHFAHHNEVMLLGHSDSYERDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSASPTINSQGNRYLAPVNPFAKEVTKRVDTPSGQWKGWNWRSEGDLLLNGAY
FTPSGAGASASYARASSLGAKSSSMVGSITSNAGALSCRRGSQC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttctcggactccctaaaccttttttctacttgtcacccatatcttcttctt
cagttagatccgtctagagagagagctttcgacccaatgccaatggcgggttccaagggg
tggacttccctctgctcactcctgctttttttcctcttcgtcgctgtgatggccaatgac
cgaaatggaggaacagagcagttgcagagctcaaacaactcatcaatggctgccaggaat
gagcatgcagttgatgacccagatgcagtggcttcaatggtggacatgagcattcggaac
agcacagagagaaggaaattaggttatttctcgtgtggaactggtaatcccattgatgac
tgctggcgatgtgaccacaattggcaaaagaaccgtaagcgccttgcagactgcggcatt
ggctttgggcgaaatgcaattgggggccgtgatggacgcttctatgtggtcactgaccct
ggtgatgatgatcctgtcaaccccaagcctggcactctgcgccatgctgtcatccaggat
gctcctctctggattgtgttcaagcgagacatggtgatcacactgaagcaggagctcatc
atgaacagcttcaaaacaatagatgggcgtggggtcaatgtccacattgctaatggagca
tgcatcaccgtccaatttgtcacgaatgttataattcatggtcttcacatccatgactgc
aagcccactgggaatgccatggtgaggagctcaccaagtcactttgggtggaggacaatg
gccgatggcgatgccatttcgatttttggttcaagccatatatgggtcgatcacaattca
ctctctagctgtgctgatggcctcgttgatgctgtcatgggctcgactgccattaccatt
tccaacaaccactttgcccaccacaatgaggtgatgctgttgggccacagtgattcttat
gaaagagacaagcaaatgcaagtgacaattgcctataaccattttggagagggtctgatc
cagaggatgccaaggtgcagacatggatatttccatgtggtcaacaatgactacactcac
tgggaaatgtatgctattggtggaagtgcaagccccaccatcaacagccagggcaacaga
tatcttgcaccagtcaatccttttgcaaaagaggtgacaaaaagggtagacacgccttca
ggccagtggaagggttggaattggaggtcagaaggagacctgctgttgaatggagcctac
ttcaccccatctggtgccggtgcctcagccagctatgctagagcttcaagcttgggagcc
aagtcctcttccatggttggctccattacttccaatgctggtgctctctcctgccgcagg
ggttcccagtgctag
DBGET
integrated database retrieval system
