KEGG   Vitis vinifera (wine grape): 100241865
Entry
100241865         CDS       T01084                                 
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
  KO
K02328  DNA polymerase delta subunit 2
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03030  DNA replication
vvi03410  Base excision repair
vvi03420  Nucleotide excision repair
vvi03430  Mismatch repair
vvi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100241865
   03410 Base excision repair
    100241865
   03420 Nucleotide excision repair
    100241865
   03430 Mismatch repair
    100241865
   03440 Homologous recombination
    100241865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvi03032]
    100241865
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100241865
DNA replication proteins [BR:vvi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    100241865
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      100241865
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     100241865
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-GeneID: 100241865
NCBI-ProteinID: XP_002279533
UniProt: F6HLJ1
LinkDB
Position
8:join(21458221..21458286,21458727..21458856,21459880..21459986,21460068..21460194,21461351..21461458,21462226..21462341,21462445..21462528,21462864..21462932,21463024..21463095,21463181..21463272,21463358..21463485,21463743..21463844,21463936..21464003,21464822..21464881)
AA seq 442 aa
MEAMEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNW
KPHLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSL
VLEDESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSR
EDKYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPR
GLLNGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLF
PGSSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAP
TAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGV
AVVLNMRNLECHALSFGTEFSS
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggaagcaatggaaatcgacgcagagaagcatctccagagaaagcagtctctctatgaa
tccctggatgagaagtttcggatcgagaaagagacgtataggggtcagcagtacagccag
atttactttgctcgactccacatgatgagaactctcatctactccctcattcctaattgg
aaaccccatttgcctgtttgtacagttttggggctggaagaaggcaaggaatgtatcatt
gttggaactctgtacaagcacatgaaacttaaaccatgcattcttgatgagtactccaag
gagagatctgtggccccgcttgtcaagcctcataactttatgcactcagatgatagtttg
gtgctggaggatgagagtggaagagttaaacttggcggaacaatgcttttaccttctgta
tatgttacagggactgttgttggtctgcatggaaaagaaaccagtgctggtgaatttttg
gtacaagatattctggacgctgacctaccaccgcagatagagctgccactaaaatcaagg
gaggacaagtatgttgtttttgtatctgggctaagtgttggaagcagcacttctaatcct
ctccaatttcagcttcttgttgatcatataacaggacatctaggagatgagaaggaacaa
ggtattgcagcacagatagttcatgttgtaattgctgggaattctgttgcagttccacgt
ggacttctgaatggacagaatttagcttcgaaggatcagtcaaggttgtccgaaccaatt
aaagagctggatatcttgttgactcagattgctgcaggtttgcctttggatatcatgcca
gggcctgatgacccagcaaacttctcattacctcaacagcccttgcatagatgccttttc
cctggatcatcagcttataactcatttagatcttgtactaatcctcattcctttgagctt
gaaaatatcagatttcttggaacatcaggtcagaatgtggatgatcttgagaagtattca
gaggcaaaagataagcttgaattcatggaaaggacgttacggtggaggcatctagcacca
acagcacctaatactcttgggtgctatccattcactgatagagatcctttcttgatcgag
agctgtcctcatgtttactttgttggtaatcaggataaatatgaaactcgcttaataaag
ggatcagagggacaggttgtaagactcatttgcattcctaaattttgtgagacgggagtt
gctgttgtgctaaacatgagaaatctggaatgccatgctctaagttttgggactgaattc
agctcataa

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