Vitis vinifera (wine grape): 100242471
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Entry
100242471 CDS
T01084
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100242471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100242471
03012 Translation factors [BR:
vvi03012
]
100242471
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100242471
Translation factors [BR:
vvi03012
]
Eukaryotic type
Release factors
100242471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
100242471
NCBI-ProteinID:
XP_059590842
LinkDB
All DBs
Position
18:complement(30628096..30629409)
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AA seq
437 aa
AA seq
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MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD
TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDEVSDDGENYDDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggtcatgaaacagataagaacattgagatatggaagatcaagaagttgatc
aaagcattggaagctgctagaggcaatggtaccagcatgatttctcttatcatgcctcct
cgtgatcaaatatcaagggttaccaagatgcttggagatgagtttggaactgcttcaaac
attaaaagtagggtcaatcgtcaatctgttttaggtgcaatcacatctgcgcagcagaga
ttgaagctgtacaacaaggttcctcctaatggtcttgtgctgtatactggcacgattgtg
actgaagatggaaaggaaaagaaggtgacaattgactttgagcctttcaggcctataaat
gcctctctttacctatgtgacaacaagttccatacggaagctctgaacgaacttttagaa
tctgacgacaagtttggttttattgtcatggatggaaatggtaccctctttggcacatta
agtgggaacaccagggaggtgcttcacaaatttactgttgaccttccaaaaaagcatgga
agaggtggccagtcggctcttcgatttgctcgtcttcgaatggagaagcggcacaactat
gtgaggaaaactgcagagcttgccacccagttttttatcaatcctgccaccagccagccc
aatgtttcagggttgatacttgctggttccgctgacttcaaaactgagctgagtcagtct
gacatgtttgatccccgtcttcaggccaaaatactgaatgtggttgatgtttcttatgga
ggtgaaaatggtttcaatcaggcaatagagttgtcatctgagatcctatccaatgtgaag
ttcattcaggagaagcgcttgatagggaaatattttgaggagatcagccaggatactggg
aagtatgtctttggcgttgatgacacactgaaagctttggagatgggtgctgttgagacc
ctgattgtgtgggaaaatcttgacattagtaggtatgttctgaaaaacaatattacgggt
gagatagtcataaaacacttgaacaaggaacaagagagcaatcagagccacttcagggat
acggctacttctgctgaattggaggttcaggaaaagatgtcactgctagagtggtttgct
aatgagtacaagcgctttggttgtacacttgagtttgtgaccaacaaatcacaagaggga
tcgcagttctgcagaggatttggtggtataggtggaattcttcgttaccagctggatatg
aggtcctttgatgaggtttctgatgatggagagaattatgatgattcagattag
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