KEGG   Vitis vinifera (wine grape): 100244563
Entry
100244563         CDS       T01084                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI4
  KO
K10752  histone-binding protein RBBP4
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03082  ATP-dependent chromatin remodeling
vvi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100244563
   03083 Polycomb repressive complex
    100244563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100244563
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     100244563
  Histone modification proteins
   HAT complexes
    HATB complex
     100244563
   HDAC complexes
    Sin3A-HDAC complex
     100244563
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     100244563
    PRC2.2
     100244563
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     100244563
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100244563
  Chromatin remodeling factors
   NuRD complex
    100244563
   NuRF complex
    100244563
   NuRF complex (fruit fly)
    100244563
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_IFT122_1st CAF1C_H4-bd Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_EML WDR55 EIF3I DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_DCAF12 DNAI3_WD Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40
Other DBs
NCBI-GeneID: 100244563
NCBI-ProteinID: XP_003632850
UniProt: A0ABY9CIK1 D7U001
LinkDB
Position
9:complement(join(1968556..1968651,1969027..1969126,1969268..1969329,1969475..1969549,1969648..1969759,1969964..1970037,1970712..1970793,1971137..1971332,1972357..1972432,1973835..1973909,1974041..1974106,1974582..1974644,1974743..1974829,1975710..1975773,1976855..1976988))
AA seq 453 aa
MKETSTAGETSISVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQR
LYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHIAQFNEEARSPFVKKFKTIIHPGEVNRI
RELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGTPESRPDLILTGHKDNAEFALAMCP
TEPLVLSGGKDKSVVLWSIQDHISTLAADPGSAKSTSKAGGGNDKPVESPSIGARGIYQG
HDDTVEDVQFCPLSAQEFCSVGDDSCLILWDARSGTTPAIKVEKAHNADLHCVDWNPHDI
NLILTGSADNTVRMFDRRKLTSGGIGSPIHTFEGHTAAVLCVQWSPDKASIFGSSAEDGI
LNLWNHEKIDKKQAPNAPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSDDGESTGGGGT
LQIWRMIDLIYRNEDEVLAELDNFKAHLATCSP
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgaaggagacgagcacagccggcgagacgtcgatttcggtggacgagaggtatacccag
tggaagtctctcgttccggtgctctacgactggctggccaaccacaacctcgtctggccc
tccctctcctgccgatggggtccgcaattggagcaagctacctataagaatcggcaacgg
ctttacctttcagagcagactgatggcagtgttccgaataccttagttatagcaaactgt
gaagttgttaaacctagggtagctgccgcagagcatattgctcagttcaacgaggaagcg
cggtcaccctttgtaaagaagttcaaaacaattatacatccaggagaggtgaaccgaatc
agggaactgccacagaatagtaagatagtggccacacacactgacagtcctgatgtcctc
atttgggatgttgaaactcaacctaatcgtcatgctgtattgggaactccagaatctcgt
ccagatttgatattaactgggcataaagataatgcagaatttgctcttgccatgtgtcca
actgaaccattggtgctctctggaggcaaggataagtctgtggtgttgtggagtattcag
gatcacatctcgactttggcagcagatccagggtcagcaaagagtacctctaaggctggt
ggtggtaatgataaacctgtagaaagcccttctataggagcacgtggtatctaccaaggg
catgatgatactgttgaagatgtgcaattctgcccattaagcgcacaggagttctgtagc
gtaggtgatgattcttgccttatcttatgggatgcaagatctggcaccactccagccatc
aaggtcgagaaagctcataatgctgatcttcactgtgttgattggaatcctcatgacata
aatcttattctaactggatcggctgacaatactgttcgcatgtttgatcgccgaaagctt
acatctggtggaattggatcaccaatccatacatttgagggccatactgctgctgtcctt
tgtgtacagtggtctccggacaaggcttcgatctttgggagttctgcagaagatggtatc
ttaaacctctggaatcatgaaaagattgataagaagcaagctcccaacgctcctccaggt
ttattcttcagacatgctggccatagggataaggtcgtggacttccattggaatgcatcg
gatccatggacaatcgttagcgtatctgatgatggtgaaagtactggtggaggcggtaca
ctccagatatggcggatgatcgatctgatttacaggaacgaagatgaggtgctggctgag
ctcgataacttcaaagctcatttggccacatgctccccctga

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