Vitis vinifera (wine grape): 100244686
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Entry
100244686 CDS
T01084
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100244686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100244686
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100244686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
KCNQ2_u3
Motif
Other DBs
NCBI-GeneID:
100244686
NCBI-ProteinID:
XP_002284034
UniProt:
D7U0D6
A0ABY9CGK2
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All DBs
Position
9:join(3443077..3443612,3445547..3445658,3446772..3447077)
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AA seq
317 aa
AA seq
DB search
MSTTVQRTPRSGRQSLFFQDLASPVSSRRGKFTSSGQAAAVSALWHDNFAGSDLPPPPMY
TLEDRSDFSPESGILDYPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTSSASLSWWSP
AKSGGDQEEKGKGSPVEGVVQPGALITLPPPREVARPEMQRNCLPAGNLDEEEWVTVYGF
SPGDTNLVLREFEKCGVILKHVPGPRDANWIHILYQNRSDAQKALSKNGMQINGVLIVGV
KPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNPLRVSPRPYYLQNGSNARQSSGAIA
SPAKSVVSKIMDLMFGV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaacagtacagagaacccccaggtcgggaagacagtcattgtttttccaggat
ttggcatctcctgtttcttccaggagaggaaaattcacaagttcaggtcaggcagcagca
gtatcggcactatggcatgacaattttgcgggttcagatcttccaccccctcctatgtat
accttggaagaccgctcagatttttctcctgaatctggaattctggattacccagtatcc
cctgaaatcaagtcagacttgaggactcctgttcatggttctggtcgggattttttaact
ccagtaaaaggcaaatctgaggcaagcacttcttcagcaagtttgagctggtggtcccct
gctaagtctggtggtgatcaagaagagaaaggaaagggttctcctgtagagggtgtggtt
cagcctggtgctttaataacgcttccacccccgagggaagttgcaaggcctgagatgcag
aggaattgcttacctgcagggaatcttgatgaggaagaatgggttactgtttatggattt
tccccaggggatactaatttagttctgcgagagtttgaaaagtgcggtgtgattttgaaa
catgtgccaggcccacgagatgctaattggatacacattttatatcagaatcgatctgat
gctcagaaagctctcagcaagaatgggatgcaaataaatggagttcttattgtgggcgtg
aaaccattggatccaatgcagcgccaggctctgaatgaaaggcttaacaatcaaggattt
atgactttaccccctccagcatccagtagaagcttggagtcaaaccctttgagagtctct
cctcgcccttattatcttcaaaatggaagtaatgcccgacagtcatctggtgccattgct
tctccagcaaaatcagtggtgtcaaagatcatggatttgatgtttggtgtgtag
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