Vitis vinifera (wine grape): 100246761
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Entry
100246761 CDS
T01084
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100246761
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100246761
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100246761
NCBI-ProteinID:
XP_002276049
UniProt:
D7TRP9
A0ABY9D066
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All DBs
Position
13:join(2225096..2225222,2225983..2226334,2226418..2226628,2226762..2226830,2227628..2227864)
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AA seq
331 aa
AA seq
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MASLPYADVDSNLRDLAGKAEGFGRLAVGGLHGPIYSVTTLADDGPGSLREGCRRQEPLW
IVFEISGTINLSSYLSVSSYKTIDGRGQRIKFTGKGLRLKECEHIIICNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLHDYDDGLIDITRQSTDITVSRCYFSQHDKTMLIGADPSHIG
DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWSVYAVCASVESQIYSQNNIYEA
GEKKVAFKYYTEMAADMEEAKSGLIRSEGDLFLSGAQSCLLTGIGEECIFHPSEYYPTWT
IELASDSLKNVLQVCTGWQAIPRPAELMTSA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctgccctacgctgatgtcgattccaacctcagagatctcgccggaaaggcc
gagggattcggcagattggccgtcggcggcctccatggccccatctattccgttactaca
ttggccgatgatggaccaggatcacttcgtgagggctgccgtagacaagaaccactttgg
attgtttttgaaatttcaggcaccattaatctttcatcctacttgagtgtatcatcttat
aagacgattgatggccggggccaaaggataaagttcacaggcaagggcctgagactcaaa
gaatgtgagcacataatcatatgcaacctggaatttgaaggtggtagaggacatgatgtt
gatggcattcaaataaaaccaaattctagacacatatggatagaccgatgcagcctgcat
gattatgatgatggacttatagatatcacccgccaaagcacagatattacagtttctaga
tgttacttctcacaacatgacaagacaatgcttattggagcagacccttctcacattggg
gacagatgcatccgggtgaccattcaccattgtttttttgatggaacgcggcaaaggcag
cctcgtgttaggtttggaaaagttcatctgtataacaattacaccagaaattggagtgtg
tatgctgtttgtgctagtgttgaatcacagatatactcccaaaacaacatctatgaagcg
ggagagaagaaagtggcttttaaatattatacagagatggcagcagacatggaggaggca
aagtctggattaataaggtctgaaggggacttgttcctgagtggagctcaatcatgctta
ttaacaggaattggtgaagaatgcatattccatccaagtgaatattacccgacatggacg
atagaactggcctcagattctctgaaaaatgtgctccaagtttgtaccggttggcaagcc
attcccaggccagcagagctaatgacaagtgcatag
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