Vitis vinifera (wine grape): 100247737
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Entry
100247737 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100247737
KO
K12817
pre-mRNA-splicing factor 18
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100247737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100247737
Spliceosome [BR:
vvi03041
]
Complex C
Other components
Step II factors
100247737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
PolyG_pol
DUF3138
Motif
Other DBs
NCBI-GeneID:
100247737
NCBI-ProteinID:
XP_002278267
UniProt:
F6HI43
LinkDB
All DBs
Position
7:complement(join(1553975..1554388,1558655..1559479))
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AA seq
412 aa
AA seq
DB search
MDLLKQELLKKRQSLAQEAGGKRFFKRSEIEQRNIQKLREQEKRELEAKALRHNNGTASS
STAAAASATSTPSSDAKPDLTSSSSKAITDEQKIDEMVLPKQEVIRRLRFLKQPITLFGE
DDTARLDRLKYVLKAGIFEVDSDMTEGQTNDFLRDIAELRKRQKTGILSDRKRKSPEDGV
EDGEGGGGDDDLSGDGGSSGVDADKDLKRMKANFEELCDEDKILVFFKRLLIEWNQELNE
KQEGEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLQDDIRQALLVVVECCMKRDYLAA
MDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFC
QRRYPTMPSKAVEFNSLANGSDLQSLLAEERFSGGNQASEERLHLMAPPKES
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctgaagcaagagctcttgaagaagcgccaatctctagcccaagaagcgggc
ggcaagaggttcttcaagcgctccgaaattgaacagagaaacatccagaagcttcgcgag
caggaaaagcgtgagttggaggctaaagccctccgccacaataatggcaccgcatcctct
tccaccgccgccgccgcctcggccacctctactccatcttccgatgccaaacctgacctc
acatcctcatcttctaaagccataaccgatgaacagaaaatcgacgagatggttctcccg
aagcaagaggtcatccggcggctcagattcctgaaacagcctattactctgttcggcgaa
gacgacaccgcgcggcttgatcggttgaagtatgtgctcaaagctgggatctttgaggtc
gacagcgacatgacggagggccaaaccaatgattttcttagggatattgcggagctgagg
aagcggcagaagacagggattttgagcgatcggaagcggaagagtccggaggatggggtc
gaggatggggaggggggcggtggagatgatgatttgagcggtgatgggggttcttcgggg
gtggatgctgataaggatttgaagcggatgaaggcgaattttgaggagttgtgtgatgag
gataagattctggtttttttcaagaggcttttgatcgagtggaatcaggagttgaatgag
aagcaggagggggagaagaggacggccaaggggaagtctatggtggccacgtttaagcag
tgtgcacgatatttgaatccgcttttcaaattctgccggaaaaaggttctccaagatgat
atccggcaagcattgctggtggtggttgaatgctgtatgaagcgagattatctagctgca
atggaccaatatatcaagttggcaatcgggaatgcaccctggcctattggtgttactatg
gttggtatccatgaacggtctgcccgtgagaagatctacacaaacagtgtggcccacatt
atgaatgatgagacaactcgtaagtatctgcaatcaatcaaaagattgatgacattttgc
caacgacgctacccaaccatgccatccaaagccgttgagttcaacagtttggcaaatggt
agtgacttacaatcactgctagcagaggagaggttttctgggggaaatcaagcttcagag
gaaaggcttcacctaatggctcctccaaaggagagctag
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