Vitis vinifera (wine grape): 100248954
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Entry
100248954 CDS
T01084
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100248954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100248954
03012 Translation factors [BR:
vvi03012
]
100248954
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100248954
Translation factors [BR:
vvi03012
]
Eukaryotic type
Release factors
100248954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
17kDa_Anti_2
Motif
Other DBs
NCBI-GeneID:
100248954
NCBI-ProteinID:
XP_059590417
LinkDB
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Position
18:10393004..10394317
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AA seq
437 aa
AA seq
DB search
MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVEDTLKALEMGAVEILIVWENLDMNRYVLKNSSTGEIVIKHLNKEQEADQNTFRD
SATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDELSDDGENYDDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcatgaaacagataagaacattgagatatggaagatcaaaaagttgatc
aaggcactggaagctgctcgaggcaacgggacaagcatgatttctcttatcatgcctccg
cgggatcaaatatcaagggttactaagatgctgggagatgagtttggcacagcttcaaac
attaaaagcagggtgaatcgtcaatctgttttgggagcaatcacatctgcacagcaaaga
ttgaagttgtacaacaaggttcctcccaatgggcttgtgctgtacactggtactattgtg
acagaagatggaaaggagaagaaggtgactattgactttgagccttttaggcctataaat
gcttccctttacctatgtgacaacaaattccatacagaagcattgaatgaacttttggaa
tctgatgacaagtttggttttattgttatggatggaaatggtaccctctttggcacatta
agtggcaatactcgtgaggtgcttcataaatttactgttgacctcccaaagaaacatgga
agaggcgggcaatcagcactacggtttgctcgtcttcgaatggagaagcgtcacaactat
gtgaggaagacagcagagcttgctacacaattttttatcaatcctgccactagccagccc
aatgttgcaggattaatactggctggctcagctgacttcaagactgagctgagtcagtct
gacatgtttgatccccgtcttcaggccaaaatacttaatgtagtggatgtttcttatgga
ggggagaatggtttcaatcaggcaatcgagttgtcctcagagatcttatccaatgtgaag
ttcattcaggagaagcgcttgattggtaaatactttgaggagatcagtcaggacactgga
aagtatgtctttggtgtggaagatacactgaaagctttggagatgggtgctgttgagata
ctgattgtgtgggagaatctggacatgaataggtatgttcttaaaaacagcagcacaggt
gagattgtcataaaacacttgaacaaggaacaagaggctgatcaaaacaccttcagggat
tcagctacctctgctgaattggaggttcaggaaaagatgtcattgctagagtggtttgcc
aatgagtacaagcgctttggttgtacacttgagtttgtcaccaacaaatcacaagaggga
tcccagttctgcaggggctttggtgggattggtggaatcctccgttaccagctagacatg
cgatcatttgatgagctttctgatgatggagaaaactacgatgattctgaatag
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