Vitis vinifera (wine grape): 100251610
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Entry
100251610 CDS
T01084
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvi03009
]
100251610
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100251610
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_14
AAA_15
AAA_27
RsgA_GTPase
AAA_28
AAA_24
AAA_22
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
100251610
NCBI-ProteinID:
XP_010651804
UniProt:
F6GWA0
LinkDB
All DBs
Position
6:complement(join(20888085..20889142,20890297..20890531,20890618..20890828,20890928..20891001,20894546..20894764))
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AA seq
598 aa
AA seq
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MVSDASKKKAAAKKAAAAAKRGGKSAAAASSKAAASAAAADVQNGVDKMADMKISDRTCT
GVLCSHPLSRDIRIESLSVTFHGHDLIVDTELELNYGRRYGLLGLNGCGKSTLLTAIGCR
ELPIPEHMDIHHLTREIEASDMSALEAVISCDEERLKLEKEAEVLAAQDDGGGEALDRVY
ERLEAMDASTAEKRAAEILFGLGFNKTMQAKKTQDFSGGWRMRIALARALFMNPTILLLD
EPTNHLDLEACVWLEETLKNFDRILVVVSHSQDFLNGVCTNIIHMQNRKLKLYTGNYDQY
VQTRAELEENQMKQYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTE
KVVRDKILVFRFTDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGA
GKSTLLKLMTGDLFPIDGMVRRHNHLRIAQFHQHLTEKLDLEMSALLYMMREYPGNEEEK
MRAAIGKFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYRQPHMLLLDEPTNHLDIETIDSL
AEALNEWDGGLVLVSHDFRLINQVAQEIWVCENQKVTRWEGDIMDFKEHLKSKAGLSG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgcgagcaagaagaaggcggcggcgaagaaggccgcggcggccgccaag
aggggaggcaagtctgctgctgccgcatcttcgaaggcggcggcgtctgcggcggccgcc
gatgtacagaacggcgttgacaagatggccgatatgaaaatatcagatcggacttgtact
ggtgtgctctgttcgcatcctctttcgcgcgatattcggatagagtctttatcggttact
ttccatggtcatgatcttatagtggatactgagctagagcttaactatggcagacgatat
ggtttacttggactgaatgggtgtggaaaatctaccctcctcactgcaattgggtgccga
gaacttcccattccagaacacatggacatccatcatctaaccagagagattgaagcttct
gacatgtctgcccttgaggctgtcataagctgtgatgaggagaggttgaaattggagaaa
gaagctgaagtgttggctgcacaggatgatggtggcggagaggcccttgatcgtgtatat
gagcgtttggaagccatggatgcatcaactgcagaaaagcgcgctgctgaaatcttgttt
ggtcttggttttaataagacgatgcaagcaaagaaaacacaagatttctctggtggttgg
agaatgaggatagcattagctcgggctttgtttatgaatccaaccattctgttactcgat
gaacccactaatcatcttgatttagaagcttgtgtctggttggaggagacattgaagaac
tttgatcgcatcttagttgtggtttcacactcccaggactttctgaatggtgtctgcaca
aatatcatccacatgcaaaacaggaaactgaagctttacactggtaattatgaccaatat
gttcaaacccgtgctgaactggaagagaaccagatgaaacagtacaagtgggagcaggac
cagattgcttcaatgaaggagtatattgcccgatttgggcatgggtctgcgaaactagct
cgccaggctcagagcaaggaaaaaactctggccaaaatggaacgtggaggccttacagaa
aaagtggttagagacaagattcttgtctttcgcttcactgatgtgggaaagcttcccccg
ccagtactgcagtttgtagaagtcacatttggctatactcctgataatctcatttacaag
aacattgactttggggtagacctggactcaaggattgctctggtgggacccaatggggct
gggaagagtactttgctgaagctcatgactggggatctgtttcctattgatggcatggtc
cggcggcacaaccacttgagaattgctcagttccatcagcacctgactgagaaacttgac
ttggagatgtctgctctcctgtacatgatgagagaatacccaggaaatgaagaagagaag
atgagggcagcaatcgggaagtttgggctgacaggtaaggcgcaggtgatgccaatgaag
aatctgtcagatggtcaaaggagccgggtgatttttgcatggttagcttataggcaacct
cacatgttgctgctggacgaaccaactaatcatttggatattgagacaattgactcacta
gctgaagcattgaatgagtgggatggtggtctggttcttgttagtcatgatttcaggctc
ataaaccaggtggctcaggagatatgggtgtgtgagaatcagaaggtgacccgctgggag
ggtgacattatggactttaaggagcatctgaagagcaaggctggattgtctggttga
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