KEGG   Vitis vinifera (wine grape): 100255233
Entry
100255233         CDS       T01084                                 
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvi03016]
    100255233
Enzymes [BR:vvi01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     100255233
Transfer RNA biogenesis [BR:vvi03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    100255233
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 100255233
NCBI-ProteinID: XP_002284873
UniProt: A0ABY9C3J8
LinkDB
Position
6:4282351..4283079
AA seq 242 aa
MGPRWKGKGAEAKALAEPMSEIVSQLQSSLTRSDSQGLLSGCSVLLEAGAEQTELLNRSC
FGRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRETFPD
FYMAYSHLRIKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSEENENANGRLRVWSD
FDCTIRLCGSVAKTLLVIHINKNGHGATTPLCLKKYSVEERTITRWSAEQCREVQTPETS
SK
NT seq 729 nt   +upstreamnt  +downstreamnt
atggggccaagatggaaagggaagggcgcagaggctaaggcacttgcagagcccatgtcg
gagatagtctcacagcttcagtcttctttaacacgttcagattctcaaggattactctca
gggtgcagtgtacttcttgaagctggagcagaacaaactgaacttcttaatcgctcatgt
tttggtcgacctgttattacagccgagaaggataagcaatggtttcagttgagcatggag
gaagcattttacctttgccattctctaggatgtctcaagattgttggtgaagataatcat
ctgaagaatgacgaagaactatggcagtacatgaaatctaggagagaaactttcccagat
ttttacatggcatattctcatcttcgaataaaaaattgggttgtgaggtcaggatcacag
tatggtgtggactttgttgcataccggcaccatcctgctcttgttcattctgaatatgct
gtgcttgtcttatcagaagaaaatgagaatgcaaatggacgattgagggtgtggtctgat
tttgactgtacaattcgactttgtggaagtgttgcgaagacattgttagtcatacacatc
aataaaaatggtcatggcgccaccactcctttgtgtttaaagaaatatagtgttgaagag
cgcacaatcacaagatggagcgcagagcaatgtcgtgaggttcagacccctgaaaccagt
tccaagtaa

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