Vitis vinifera (wine grape): 100257557
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Entry
100257557 CDS
T01084
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
vvi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100257557
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100257557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100257557
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100257557
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100257557
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
100257557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_like
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
100257557
NCBI-ProteinID:
XP_002267709
LinkDB
All DBs
Position
16:21822333..21823484
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AA seq
383 aa
AA seq
DB search
MKNFSTRFNPQGSEVENPNIQEEKREQHIEEERARRDWEFSLSTVVSSSSDGASTDTIGI
IEFDPSDNLVVTGGIARKIRVYSIKSFLSDENHSHGERKVTWLQHNDACDYYVCTPAKLS
SLRWKPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGGRRIWSVDYSHWDPFVGASG
SDDGTMQMWDPRCEGIKNVAKVRPSGGGSAVCCVEFNPFGGPLIAVGCADRRAYGYDVRK
MVDPVLIFDGHQKTVTYVRFLDQHTMVTSGTDGCLRLWSMHDARMIRVYMGHMNTRSFVG
LSVWRTGGLLGCGSENNHVFVYDKRWGEPIWVHEFGVGSRDGRDPNFVSSVCWRQVGGED
GCTLVAGGSDGILEVIVGKKKAF
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttctcaacgcgattcaatcctcaaggctcagaagtggagaacccaaacata
caagaagaaaagagagagcaacacatcgaagaagaaagagctagacgcgactgggaattc
agtctctccactgttgtttcttcgagctctgacggagccagcaccgacaccatcggcatc
atagagttcgacccctctgataacctcgtggtcaccggaggaatcgctaggaaaattagg
gtttatagtataaaatccttcttgtccgacgaaaatcatagccatggtgagcgcaaagtt
acatggttacaacataatgatgcatgtgactactatgtatgtaccccagccaagctcagt
agcctaaggtggaaacctggctccgccggccgagtactaggctctggtgactacgatggg
gtggtcaccgagtacgatctcgaccaaaaaatccccattttcgaacgtgacgagcacggt
ggacgcagaatctggagcgtggactactcacattgggatccgtttgttggcgcgtcgggc
tctgacgacggcaccatgcaaatgtgggatccacgttgcgagggtataaagaatgtggcc
aaagtacgacccagcgggggtggtagcgcggtgtgttgtgtggagttcaaccccttcggt
ggtccattgatcgctgtcgggtgtgcggaccgaagagcctatggctatgacgtgaggaag
atggtcgacccggtactaatatttgacgggcaccaaaagaccgtgacctacgtgcggttt
ctggatcagcatacgatggtgacatcagggacggatggctgcttaaggctttggagtatg
catgacgcccgaatgattcgggtgtacatggggcatatgaacactcggagctttgtgggg
ttgtcagtgtggagaacaggcgggttactgggatgcgggtcggaaaataaccatgtattt
gtgtacgacaagaggtggggtgagcccatatgggtgcatgaatttggggtcgggagtcga
gatgggcgtgacccgaattttgtgagcagtgtgtgttggaggcaagtgggcggtgaggat
gggtgcacccttgtggctggtgggtcggatgggattttggaggtgattgtggggaagaaa
aaagcattttga
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