Vitis vinifera (wine grape): 100262241
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Entry
100262241 CDS
T01084
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
100262241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100262241
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100262241
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
100262241
NCBI-ProteinID:
XP_002267745
UniProt:
A0A438CU39
E0CUJ9
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All DBs
Position
16:join(24423685..24424104,24424308..24424838,24425302..24425367)
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AA seq
338 aa
AA seq
DB search
MGDSLSDFFEEPEFGGETSLTGVASPDDLDLFSIFESLEGVSEVPPLEETVLGSKEGEET
ARLVSQKSTSSSALQESETELEASPKRKRPKLAAPTSSEEGNPDGQQRVSHITVERNRRK
QMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKKQRKVYSEVLSPR
VVSSPRPPPISPRKPPLSPRISLPISPRTPQPTSPYKPVRLQQGYLSPTIAPSLEPSPSS
STSSNDNANELIVNSKSAIADVEVKYSCPNVVLKTKSSRIPGQAVKIISALEDLSLEILH
VSISSIDETMLNSFTIKFGIECQLSAEELAHQVQQTFC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatagtttatccgacttctttgaagagcctgagtttggtggcgaaaccagcttg
actggcgtagcttcccccgacgatctcgatctcttcagcattttcgagagtctggagggt
gtctccgaggttcctccattggaggagactgtgttgggctccaaagaaggtgaggaaaca
gcaagattggtctctcaaaaatctacttcttccagtgctttgcaggagtccgagacggag
ctcgaagcttccccgaagaggaagaggcccaagctcgccgcacccacttcgtccgaagag
gggaacccagatggacaacagagggtgtcgcatataactgtggagaggaaccgcagaaag
caaatgaacgagcatttatcagtgttgaggtcccttatgccttgcttctatgtcaaaaga
ggagatcaagcatccataataggcggggtggtggattacatcaaggagttgcagcaagtt
ctacggtcacttgaagccaagaagcaaagaaaagtttacagtgaagttctaagccctagg
gttgtttcaagtccaaggcctccgccaatcagccctagaaagccaccattaagccctaga
ataagcttacccataagcccaagaaccccgcaaccaaccagcccttacaagcctgttagg
ttgcagcagggttacctttccccgaccatagctccttccctcgaaccatctccttcttct
tcaacctcctccaatgacaacgccaacgagctcatcgtaaattcaaaatcagccattgct
gacgtagaggtgaagtactcctgcccaaacgttgttttgaagacaaaatcttcacggatt
cccggccaagcagtgaaaatcatttccgctctagaggacctttcgcttgaaattctccat
gttagcatcagctcaatcgatgaaaccatgctcaattccttcactatcaagtttggaatt
gaatgccaacttagcgccgaggaactcgctcaccaagtccagcagacattctgctaa
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