Vitis vinifera (wine grape): 100265064
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Entry
100265064 CDS
T01084
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
vvi
Vitis vinifera (wine grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
DUF445
Motif
Other DBs
NCBI-GeneID:
100265064
NCBI-ProteinID:
XP_010658540
LinkDB
All DBs
Position
13:join(3402287..3402922,3406948..3408521,3408610..3408751,3408870..3408977,3409767..3409979,3410077..3410187,3411875..3412069,3413352..3413526,3414255..3414292)
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AA seq
1063 aa
AA seq
DB search
MITDTYSKMMSDIGMRSMPGNAEYREDLGLLIREQRRQEVAASDREKELSIYRSGSAPPT
VEGSLSAVGGLFGGGGDGSDTGFASEEELRADPAYVNYYYSNVNLNPRLPPPRLSKEDWR
FAQRLHGGGAGGGGSGSSSSVGGIGDRRKVGRGGDGNGSSLFLMQPGFNGQKDENGAESR
KAQGVEWGGDGLIGLPGLGLGSRQKSLAEIIQDDIGHATSVSRHPSRPASRNAFDDNVET
SEAQFSHLHHELASMDALRSGTKIQAISAVQNVASSASHTYASALGASLSRSTTPDPQLV
ARAPSPRIPTVGGGRTSSMDKRSGNGSNSFNSVPPGIGESADLVAALSGLNLSTNGMVDG
ENHSRSQIQHEIDDHKNLFNLQGDQNHIKHHSYLNKSESGNFHLHSVPQSAKGSYSNMGK
GSGVGMDLNKSALLAEGQVELQKSSASSANSFLKGPSTPTLTSGGSLPSHYQNVDNVNSS
FSNYGLSGYTFNPASPSMMGSQHGSGNMPPLFENVAAASAMGVTGMDSRALGGGLNLGPN
LMAAASELQNLRVGNHTTGNALQVPVVDPLYLQYLRSAEYAATQGVALNDPTMDREYMGS
SYMDLLGLQKAYLGALLTSQKSQYGVPYLGKSSSMNHGYYGNPQFGLGMSYPGSPLAGPL
LPNSPVGSGSPVRHNERNMRFPSGMRNLAGGVMGAWHSEAGGNLDDNFVSSLLDEFKSNK
TKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNY
VIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMELDGN
VMRCVRDQNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDP
KTQRIMMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQMSQQKFAS
NVVEKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELI
LNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGVQSSLPA
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgataactgatacttattccaagatgatgtccgatatcggaatgcgatcgatgccggga
aacgctgaatacagagaggatttggggctgttgattcgggagcagcggcggcaggaggtg
gcggcgagtgatcgagagaaggagctcagtatataccgaagtggttcggcgccgcccacc
gttgaaggttcgttgagcgccgtaggagggttattcggtggcggcggcgatggcagcgat
acagggtttgcgtcggaggaggagctccgcgccgatccagcgtatgttaattattactat
tcgaatgtgaatttgaatcctcgactcccaccaccacggctatcgaaggaggattggcgc
tttgcgcagcggttgcacggaggaggagccggcggtggcggcagtgggagttcatcatca
gtgggagggattggggatcggagaaaggtgggtagaggcggtgatggtaatgggtcatcg
ctatttttaatgcagccgggttttaatgggcaaaaagacgagaatggggcagagtcaagg
aaagcccagggggtggaatggggtggcgatggactgattgggttgccggggttggggcta
ggtagcagacagaagagtctcgctgaaatcatccaggatgatataggtcatgctacatct
gtctctcggcacccttctcggcctgctagccgcaatgcatttgatgataatgttgaaact
tctgaagctcagttttctcatttgcatcatgaattggcatctatggatgctttacggtca
ggcacaaaaattcaagccatatctgcagtgcaaaatgttgcttcttcagcgtcccatact
tatgcttctgctttaggtgcctctttgtcaagaagcaccacacctgatcctcaacttgta
gctagggctcctagtcctcgaattccaactgtgggaggaggaaggactagctctatggac
aaaaggagtggtaatggttcaaactcattcaatagtgtcccacctggtattggcgagtct
gcagatctggtagctgctttgtctggcttgaatctgagtaccaatggtatggtggatgga
gagaatcattcccggtcacaaatacagcatgagattgatgaccacaagaacctcttcaac
ttgcaaggcgatcagaaccatataaaacaccattcgtacttaaataagtctgaatctggg
aattttcatctacattctgttccccaatcagccaaaggatcatattcaaatatgggtaaa
ggcagtggggtggggatggatctgaacaagtctgcccttctagctgagggacaagttgaa
cttcagaaatcgtctgcttcatctgctaactcattcttaaaagggccatccacaccaact
ctcactagtggaggaagtttaccttctcactatcagaatgtggataatgtgaattcctca
ttctcaaactatggtttaagtggatacacttttaatcctgcatcaccatccatgatggga
agccagcatggcagtggcaacatgccacctttgtttgaaaatgttgctgctgcatcagca
atgggagtcactggcatggactctagagcactgggtggaggtttgaatttaggaccaaat
ttaatggctgcagcatcagaactgcagaatcttagagtgggaaaccacactacaggaaat
gctcttcaggtgcccgttgtggatccattgtatcttcagtacttaagatcagctgagtat
gctgccacacagggtgtggctcttaatgacccaacaatggacagggaatacatgggcagt
tcatacatggatttgcttggacttcagaaagcttacctaggggcattgcttacatctcag
aaatcacagtatggtgttccttaccttggtaaatctagtagtatgaatcatggttattat
ggaaacccacaatttggtcttggcatgtcttatcctgggagcccattagcgggtcccctt
cttccaaactctcctgttggatctggtagtcctgtcagacacaatgagcggaatatgcga
tttccctctgggatgaggaacttggctgggggtgtcatgggagcttggcactcagaagct
ggtggtaacttggatgataattttgtgtcctcattgctggatgaatttaagagcaataaa
actaagtgttttgaactttcagaaatttccggtcatgttgttgagttcagtgctgatcag
tatggaagtcggtttattcaacaaaaactcgagactgcaacaacagaagaaaaggacatg
gttttccatgaaattatgccccaagccctttctctaatgactgatgtctttggtaactat
gtgatccagaagttttttgagcatgggactgcatcccaaataagggaactggctgaccaa
ctcactgggcatgtattaacccttagccttcaaatgtatggctgtcgagtaatccagaag
gctatagaagttgtagatctggatcagcagactaaaatggtcatggagctagatggtaat
gtcatgcgttgtgtacgtgatcaaaatgggaaccatgttatccagaagtgtattgaatgc
atacctcaagattctattcaatttattatctcaacattttatgatcaagttgtgacactg
tccacacatccatatggttgccgtgtgatacagagagtcctggagcactgtcatgatcca
aaaacccaacgtataatgatggatgagattttgcagtctgtccgcatgttagctcaggat
caatatgggaattatgttgtacagcatgttctggagcatgggaagcctcatgaacggtcc
tctataattaatgaattagctgggcagatagttcaaatgagccagcagaagtttgcctcc
aatgtggtagaaaagtgtttaacttttggagctccttcagaacgtcagatcctggtgaat
gagatgcttggctccactgatgaaaacgagcctcttcaggcgatgatgaaagatcagttt
gcaaactatgttgtacagaaagtgctggagacatgtgatgaccagcaacttgaactgatc
cttaatcgaataaaagttcatttgaatgctctgaagaaatatacttatgggaagcatata
gttgcgcgtgtagagaaacttgtggcagctggagaaaggaggattggtgttcagtcttca
cttcccgcttag
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integrated database retrieval system
