Vitis vinifera (wine grape): 100267540
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Entry
100267540 CDS
T01084
Name
(RefSeq) pectate lyase-like protein 3 precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100267540
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100267540
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF5026
Motif
Other DBs
NCBI-GeneID:
100267540
NCBI-ProteinID:
NP_001290001
UniProt:
E7BTN4
A0ABY9CEI1
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All DBs
Position
8:join(19976411..19976601,19976993..19977899,19978135..19978337,19978646..19978814)
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AA seq
489 aa
AA seq
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MLDVDHSRRKPTQTHPSASAMLRRTCIVLISLLSSLSALATPMQNLTLLGQHPDPEAVVQ
EVQRRVNVSVSRRQTLEVSQSDQSSSCVTGNPIDDCWRCDPNWEADRQRLADCAIGFGQY
ALGGKGGQIYVVTDSSDHDAVTPRPGTLRYAVIQSDPLWIVFATNMLIKLSQELIFNSYK
TLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCVQSGEANVRSSPTHYGWRTLSDGDG
ISIFGSRDIWIDHCSLSHCKDGLIDAVMGSTGITISNNFFSHHDEVMLLGHSDSYVPDSG
MQVTIAFNHFGEQLVQRMPRCRRGYIHVVNNDFTRWEMYAIGGSGSPTINSQGNRYTAPS
NRNAKEVTKRVDTDEKKWRDWNWRSEGDILVNGAFFIASGETVEVLYEKAYSVEPKSAAL
IDQLTTNAGVLGGSGNNLGTWRTERSGGGYGFGDDYSENMLSGSPSSFALSSTLLPPLFL
LSSFLLLYL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtagatcattctcggagaaaaccaacccagactcatccttctgcatcagcc
atgcttcgcaggacctgcattgtcctaatctctcttctaagctcactttctgcacttgct
acgccaatgcagaacctcaccctcctcggtcaacatccagaccccgaagctgttgtccaa
gaagttcaaagaagagtaaatgtgtcggtgtcaagaagacaaacactagaagtgtcccaa
agcgaccagtcctcctcatgcgtcacgggaaaccccatagacgactgctggaggtgcgac
cccaactgggaagccgaccgccaacgcctcgccgactgcgccattggattcggccagtac
gccctcggcggcaaaggcggtcagatctacgtcgtcaccgactcctccgaccacgacgcc
gtcacccctcgccccggcacactccgctacgccgtcatccagtccgaccctctctggatc
gtctttgccaccaacatgctcatcaaactctcccaggagctcatcttcaacagctacaaa
accctagacggccgtggcgccaacgtccacatcgtcggaggcggttgcatcactctccag
tacatcagtaacgtcatcatccacaacatccacatccaccattgcgtgcagtcgggcgag
gctaacgtgcggtcgagccccacacactacgggtggcgcacactgtcggacggtgatgga
atatcgatattcggatcacgagacatatggatcgaccactgttcgttgtcccattgtaaa
gacggtttgatcgatgcagtgatgggttccacaggcataacaatatccaacaactttttc
tcgcatcacgatgaggtgatgctgttaggtcacagcgattcgtatgtgcccgattcaggg
atgcaggtcactatagcatttaatcactttggtgagcagctggtgcagcggatgcctagg
tgcagacgcggctatatacacgtggtcaacaatgattttactcgttgggagatgtatgct
attgggggtagcggtagccccaccatcaacagccaggggaatcgctataccgcgccttcc
aatcgcaacgccaaggaggtgacgaagcgcgtggatacggatgagaagaagtggagggac
tggaattggaggagcgagggggacatattggtgaacggagccttcttcattgcatcaggt
gaaaccgttgaggttctctacgaaaaagcctacagcgtggagcccaaatctgctgccctc
attgatcaacttaccactaacgccggtgtcctcggtggcagcggcaacaaccttggaacg
tggaggacagaacgaagtggtgggggatatggttttggtgatgactactccgagaatatg
ttgagcggctcaccatcctcctttgccctttcttccactctccttcctcctttatttctc
ttatcttcctttctactcttgtacctctaa
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