Vitis vinifera (wine grape): 4025099 Help Entry 4025099           CDS       T01084                                  Symbol rpoB, ViviCp013 Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism vvi  Vitis vinifera (wine grape) Pathway vvi03020   RNA polymerase Brite KEGG Orthology (KO) [BR:vvi00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     4025099 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vvi03021]     4025099 (rpoB)    03400 DNA repair and recombination proteins [BR:vvi03400]     4025099 (rpoB) Enzymes [BR:vvi01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      4025099 (rpoB) Transcription machinery [BR:vvi03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      4025099 (rpoB) DNA repair and recombination proteins [BR:vvi03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       4025099 (rpoB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Peptidase_M23 Motif Other DBs NCBI-GeneID:  4025099 NCBI-ProteinID:  YP_567068 UniProt:  Q0ZJ28 A0A6G7S8B6 LinkDB All DBs Position CP:complement(25361..28573) Genome browser AA seq 1070 aa AA seqDB search MFRGGNEGMSTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV EPLIKERDAVYESLTYSSELYVSAGLIWKTSRDMQEQTIFIGNIPLMNSLGTSIVNGLYR IVINQILQSPGIYYRSELDHNGISVYTGTIVSDWGGRLELEIDRKARIWARVSRKQKISI LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKESAILEFYQQFACVGGDPVFS ESLCKELQKKFFQQRCELGRIGRRNINRRLNLDIPQNNTFLLPQDILAAADHLIGMKFGM GILDDMNHLKNKRIRSVADLLQDQFGLALIRLENVVRGTICGAIRHKLIPTPQNLVTSTP VTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGR ICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERSKKVRMLYLSPSRDEYYMVA AGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVPVIAEHEGKIVYTDTDKIILSGN GDTLSIPLVMYQRSNKNTCMHQKAQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIPHLEAHLLRNL DKNGIVILGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG GRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMP YLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDEKYEQEASRKLV FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHG RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL GTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgttccggggtggaaatgagggaatgtctacaatacctgggtttaatcagatccaattt gaaggattttgtaggtttattgatcagggcttgacagaagaactttataagtttccaaaa attgaagatacagatcaagaaattgaatttcaattatttgtggaaacatatcaattggtg gaaccattgataaaagaaagagatgccgtgtatgaatcactcacatattcttctgaatta tatgtatctgcgggattaatttggaaaaccagcagagatatgcaagaacaaacaattttt attggaaacattcctctaatgaattccctgggaacttctatagtaaatggactatacaga attgtgattaatcaaatattgcaaagccccggcatttattaccggtcagaattggaccat aacggaatttcggtctataccggcaccatagtctcagattggggaggaagattagaatta gagattgatagaaaagcaaggatatgggctcgtgtgagtaggaaacaaaaaatatctatt ctagttctatcatcagctatgggttcgaatctaagagaaattctagagaatgtttgctat cctgagatttttttgtctttcctgaatgataaggagaaaaaaaaaattgggtcaaaagaa agtgccattttggagttttatcaacaatttgcttgtgtaggtggggatccggtattttct gaatcattatgtaaggaattacaaaagaaattctttcaacaaagatgtgaattaggaagg attggtcgacgaaatataaaccggagactgaatcttgatatacctcagaacaatacattt ttgttaccgcaagatatattggcagctgcggatcatttgattggaatgaaatttggaatg ggtatacttgacgatatgaatcatttgaaaaataaacgtattcgttctgtagcggatctc ttacaagatcaattcggactggctctaattcgtttagaaaacgtggttcgaggaactata tgtggagcaattaggcataaattaataccgactcctcagaatttggtaacttcaactcca gtaacaactacttatgaatcttttttcggcttacacccattatctcaagttttggatcga actaatccattgacacaaatagttcatgggcgaaaatcgagttatttgggccccggtgga ttgacagggcgaactgccagttttcggatacgagatatccatcctagtcactatggacgc atttgcccaattgacacgtctgaaggaatcaatgttggacttattggatccttagcaatt cacgcgaggattggtcattggggatctctagaaagcccattttatgaaatttctgagaga tcaaaaaaggtacggatgctttatttatcaccaagtagagatgaatactatatggtagcg gcaggaaattctttggcactgaatcagggtattcaggaagaacaggttgttccagctcga taccgtcaagaattcctgactattgcgtgggaacaggttcatcttcgaagtatttttcct ttccaatatttttctattggagcttccctcattccttttatcgagcataatgatgcgaat cgggctttaatgagttctaatatgcaacgccaagcagttccgctttctcggtccgagaag tgcattgttggaactgggttggaacgtcaagcggctctagattcaggggttcccgttata gccgaacacgagggaaagatcgtttataccgatactgacaagatcattttatcaggtaat ggagatactctaagtattccattagttatgtatcaacgttccaacaaaaatacttgtatg catcaaaaagcccaggttcggcggggtaaatgcattaaaaagggacaaattttagcggat ggggccgctacagttggcggagaactagctttggggaaaaacgtattagtggcttatatg ccatgggaaggttacaattctgaagatgcggtactcattagcgagcgtctggtatatgga gatatttatacttcttttcacatacggaaatatgaaattcagacccatgtgacaagccaa ggccccgaaaggatcactaacaaaataccgcatttagaagcacatttactccgcaattta gacaaaaatggaattgtgatactgggatcttgggtagagacgggcgatattttagtaggt aaattaacgcctcagatggcgaaagaatcatcgtatgccccggaagatagattattacga gccatacttggcattcaggtatccacttcaaaggaaacttgcctaaaactacctataggt ggtcgaggtcgagttattgatgtgcgatggatccagaaaaagggtggttctagttataat ccagaaacgattcgtgtatatatttcacagaaacgtgaaatcaaagtaggtgataaagta gctggaagacatggaaataagggtatcatttccaaaattttgcctagacaagatatgcct tatttgcaagatggaagacctgttgatatggtctttaacccattaggagtaccgtcacga atgaatgtaggacagatatttgaatgctcgctggggttagcggggggtctgctagacaga cattatcgaatagcaccttttgatgagaaatatgaacaagaggcttcgagaaaactagtg ttttctgaattatatgaagccagtaagcaaacagcgaatccatgggtatttgaacccgag tatccgggaaaaagcagaatatttgatggaagaacgggagatccttttgaacaacctgtt ataataggaaagccttatatcttgaaattaattcatcaagttgatgataaaatccatgga cgttccagtggacattatgcacttgttacacaacaaccccttagaggaagggccaagcaa gggggacaacgggtaggagaaatggaggtttgggctctagagggatttggagttgctcat attttacaagagatgcttacttataaatctgatcatattagagctcgccaggaagtactt ggtactacgatcattggaggaacaatacctaaccctgaggatgctccagaatcttttcga ttgctcgttcgagaactacgatctttggctctagaattgaatcatttccttgtatctgag aagaacttccagattaataggaaggaagcttaa

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