Vicia villosa (hairy vetch): 131616067
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Entry
131616067 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131616067
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131616067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131616067
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131616067
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131616067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
131616067
NCBI-ProteinID:
XP_058743279
LinkDB
All DBs
Position
LG7:complement(97977184..97997042)
Genome browser
AA seq
2406 aa
AA seq
DB search
MTLGSSRIMANFSSTASNQIRFLLNSLNEVNFDSVLQQLSQFTEFGTVGCILLLQTCLDH
FNYVRRDRKDMQHEPILAAVVKYLLDKPNFSTVFSESMKNVDINESFLESFCNGLHLSLL
EKIAVSVALSDSENPDARLCGKNFCMTQIEELYANPGSLSFHEQIHSVIMFLKQSEGLSE
HVDSFMQILSLVQFNDTPPFVLTPMLPDEMHGADFLRWNMEFIHESEENDFDAILADIQK
EMNMGDLVKELGYGCTVDVSQCKEVLSLFLPLTDNMLSKLLGAIAHSHAGLEDNQSTFLT
FGSALGYNNLSELPPLNSWNIDVLIDTVKSLAPQTNWVRVIENLDHEGFYLPSEEAFSFL
MSVYKHACKEPFPLRAVCGSVWKNTEGQLSFLKYAVTAPPEMFTFAHSARQLAYADAIHG
HKLQNGHANHAWLCIDLLDVLCQLAEKGHASVVWSILDYPLKHCPEILLLGMSHVNTTYN
LFQREVSLIVFPMIVKSDVGSGMILHLWYINPNLVLRGFMDSQNDDVGSIVRIVDLCQEL
KILLPVVEVIPYYYSIRLAAVASRKNILDLEKWLSNNLTTYKDAFFEECLKFLKEVQAVG
SHNLSDQSFHLSVGVLSFFTDTTAIFLKVLKSHTDLVTSGLLSEELESLHISIIDSNPRL
QNSETTDSPTSTQFPIDVEDEANAIFQEMFHEKISIPLVVQRLIRFSESSVKRDNLIFEC
MVANLFEEYKFYPRYPEMQLKIAGLIFGCVIKHRLVTHLSLGIALRYVLDALRKPADSKM
FMFGSLALEQFVDRLIEWPQYCNHILQISHMRSTHSEIVAFIEQALARISSGHTDVDGTT
HSSAVISNHSSAQATLGHVELSGSSIIQPGQQHLSMQLQQRRENSLDDSHKTSVGSSTDM
KPPLASLGQSSVIIPADTSSGNKLHNTVSASSMLSSSSGFVRPSRGTTSARFGSALNIET
LVAAAEKRETPIEAPGSEVQDKISFLINNIASTNSEAKAKELTEILKEQYYPWFAQYMVM
KRASIEPNFHDMYLKFLDKVNSKALNRAIILATYENCKVLLGSELIKSSSEERSLLKNLG
SWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPCQNSLAYQPPNPW
TMGILGLLAEIYSMPNLKMNLKFDIEVLYKNLGVDMKDVTPTSLLKDCKREIEGNPDFSN
KDVGASSQMISDIKSSLVPPVNQVELPLEVTNPSNSGAHPHMMSQYAGPLHISSGTLMED
EKVAPLSLSDQLPSAQGLLQANTAPAPFQLPTPMHAIGTHVIINPKLSSFGLQVHFQRAV
PIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDDKRIKNASHLMVASLSGSLA
HVTCKEPLRASISNQLKTSLQSLNIGNEILEQAVQLVTNDNLDLGCAVIEKAATDKAIKT
IDAEIIQQLSLKKKQREGMGSTFFDANLYPQGSMVGVPEPLRPKPGQLSPSQQRVYEDFV
RLPWQSHSSQNSHSMSASVSVQSANSGITGTSAPASGQINPGYSLTTGYEGLSRPIDDMP
EPNFTPHHSASSINIRAADSVSQHSMEKDSVASFPSTASTPELHAVDSSDAGKESGASSQ
PLVSSGAVERIGSNFLESSLSTRDALDKYQIVAQKLEALVNNDSREAEIQGVISEVPEII
LRCVSRDEAALAVAQKVFKGLYDNASNSVHVYAYLAILTAIRDVCKLAVKELTSWVIYSD
EERKYNKDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVVS
ELHNLIDALAKLATKPGYPESLQQLIEMIKNPVALSAINAGKEDKSRQSRDNKGPSLLVA
NREELNIVDSAKPDPAGFREQVSMLFAEWYRICELPGANDTSATHFIVQLHQSGLLKGDD
MTDRFFRLLMEIAVAHCLSTEGINSGAPQSPQQMLSMSFLAIDIYAKLVFSILKGSSKLF
LLSKILAVTVRFIVKDAEEKKVSFNPRPYFRLFINWLLDLGSLEPVTDGANLQILTGFAN
AFHALQPLKVPGFSFAWLELVSHRSFMPKMLTGNLQKGWPYIQRLLVDLFQFMEPFLRHA
ELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRL
PDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKTDIDEYLQTREQPSPLLSELKEKL
LLSPNEAASAGTRYNVPLINSLVLHVGMQAIEQLKARAPHAQSPQTTYGLAVFSVGAALD
IFQTLIVDLDTEGRYLFLNAVANQLRYPNTHTHYFSFVILYLFAESNQEIIQEQITRVLL
ERLIVNRPHPWGLLITFIELIKNLRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVEES
MVSGWV
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atgactctcggttcctcgcgaatcatggccaatttttcctccacagcttccaatcagatt
cgcttcctgctcaactccttgaacgaagtcaactttgactccgttctccagcaactttct
cagttcactgaatttggaaccgttggatgcattttgctactccaaacttgcttggatcac
tttaattatgtcagaagagatagaaaagatatgcaacatgagccaattcttgcggcagta
gttaagtacctcttggataaaccaaacttcagcacagtgttttccgagtcaatgaagaat
gtagacattaatgaaagctttctggaaagcttttgcaatggattacatctctctttattg
gagaaaattgccgtcagtgttgcattatctgattctgaaaatcccgatgccaggctatgt
ggcaagaatttttgcatgactcagattgaagagttgtatgccaatcctggttctctgagt
ttccatgagcaaattcacagtgttatcatgttcctcaagcagtccgagggtctctctgag
catgtagattcctttatgcagatattgtcgctggtgcagttcaatgacacaccacctttt
gttttgaccccgatgctacccgacgagatgcatggggctgattttttgaggtggaatatg
gagttcatccatgagagtgaagaaaatgattttgatgctattttggcagacatacagaag
gaaatgaacatgggggatcttgtgaaggaactaggttatggatgcacagttgatgtctca
cagtgcaaggaagtattgtcactcttcttacctttaacggataatatgctctctaaatta
cttggtgctattgcacactctcatgctgggctggaggataaccagagcacattcttaact
ttcggctcagcccttggatataataacttgtccgagttacctccacttaactcttggaat
attgatgtgttgatagatacggtcaaaagtcttgcaccacaaaccaattgggtccgtgtt
attgaaaatcttgatcatgaaggattttaccttcccagtgaagaggcattctcttttctt
atgtctgtttataagcatgcttgtaaggaaccatttcctctccgcgccgtctgcggatct
gtctggaagaatactgagggtcagctgtcttttcttaaatatgctgtaaccgcaccgcca
gaaatgtttacatttgcgcactctgcgaggcaactggcatatgctgatgcaattcatggc
cacaagcttcaaaatggacatgcaaatcatgcctggctgtgtattgaccttttggatgtc
ctatgccagctagctgagaagggtcatgccagtgttgtttggtcaatcctggattatccc
cttaaacactgtccagaaatattgcttcttgggatgtcccatgttaatactacttacaac
ctcttccagcgagaagtatctctgattgtttttcccatgatagtaaaaagtgatgttggt
agtggaatgattctacacctttggtacataaatcccaatctggtcctgcgaggctttatg
gattctcaaaacgatgatgtaggcagcattgtgagaattgtagacctctgccaagagctt
aagattctattacctgtggtggaagttattccctattattatagtataaggttagcggct
gttgcttcaagaaaaaatattcttgaccttgagaagtggttgagtaacaatttaactaca
tacaaggatgccttctttgaggagtgcctaaagtttttgaaggaagtccaagctgtcgga
tcacataatttatctgaccaatcttttcatctgtctgttggtgttctgagtttctttact
gatacaactgctatattcttgaaggttctcaagtctcatactgacttggttacctctgga
ctactttctgaggagctggagagtttgcatatatctattatagattcaaatccaagactt
caaaatagcgagactactgattcacctacttctacacaatttccaattgatgttgaagat
gaagcaaacgcgatcttccaagagatgtttcatgaaaagatatccatccctctagtggtg
caaagactaatccgattcagcgaatcttctgtgaagagagacaatttgatttttgaatgc
atggttgcaaacttgtttgaggagtataagttttacccaaggtatccagaaatgcaactc
aaaattgccggacttatctttggttgtgtgattaagcatcgtcttgtgacacatctctct
cttgggatagctcttcgatatgttcttgatgcattgcgcaagcctgcggattctaaaatg
tttatgttcggaagtttggcactggagcaatttgtggatcgtcttattgagtggcctcag
tattgcaatcacattttgcaaatttcccatatgcgcagcacacattccgaaatagttgct
ttcatcgaacaggctctggctaggatatcctctggtcatactgatgtagatgggacaact
cattcttctgctgttatcagtaaccatagttctgcacaagcaacattaggtcatgtagag
ctcagcggctccagcatcatacaacctgggcagcagcatttgtcaatgcagcttcaacag
agacgtgagaattctctggatgattctcacaagacctctgttggttcatcgactgatatg
aaacctccgttagcttctctagggcaatcttcagtgattataccggctgatacttctagt
ggcaataagttacataacacagtcagtgcctcgtcaatgttgtcttcttcttctggtttt
gttcgtccgtctcgtggaaccacttctgccaggtttggatctgccttgaatattgaaact
ttggtcgctgctgcagagaaaagagaaactcctattgaggctccagggtcagaggttcaa
gacaagatatcgttcctaattaataatatagcttctactaatagcgaagccaaagcaaaa
gagctcactgaaattttgaaagagcagtactatccatggtttgcacagtatatggtcatg
aaaagagcaagcattgagccaaatttccatgacatgtacctgaaattcttagacaaagtt
aattcaaaggctttgaacagagcgattatcctggcaacatatgaaaattgcaaggttctt
ttaggatccgaacttataaaatccagttcagaagagcgctctttgcttaagaatctgggc
agctggcttggaaagttgactattggacggaatcaagttttgagggctcgtgaaatagat
ccgaaatctttgattatagaggcatatgagaaggggctgatgattgctgttattccattt
acttcaaaggtccttgaaccatgccaaaacagtcttgcatatcagccccctaatccttgg
accatgggcattttaggattgcttgctgaaatttattcaatgccaaacttgaaaatgaac
ctcaagtttgacatagaggttttatacaaaaatcttggcgtggatatgaaggatgtgaca
ccaacttctctcctgaaggattgtaaaagagaaattgaaggaaaccctgatttctctaat
aaagatgttggagcatcatcacagatgatttctgatataaaatccagccttgttcctcca
gtaaatcaagtagagctaccacttgaagtcaccaatccatccaatagcggggctcatcca
catatgatgtctcagtatgctggcccacttcatatttcctcgggaacattgatggaagat
gagaaagtagcacctctgagcttatctgatcaattaccttctgctcaaggattgttacag
gcaaatactgctccagcacctttccagctcccaacacccatgcatgctataggaactcat
gttattataaatcctaagctcagtagttttgggttacaggttcattttcaaagagcggta
cctattgcaatggacagagccatcaaagaaatagtgtccagtattgtgcaacgcagcgtt
tccatagctacccagacaacaaaggaacttgttttaaaggattatgcaatggaatcagat
gataaacgtattaaaaatgcgtcacacttgatggttgctagtttgtctgggagtttggct
catgtgacatgcaaagaacctttacgggcatcaatatcaaatcaactgaagacttcactt
cagagtttaaatatcggaaacgaaattttggaacaagctgtgcaacttgttaccaatgat
aatctagatcttggttgtgcagtcattgaaaaagctgccactgataaggcaataaaaacc
atcgatgcagagattattcaacaactttctttgaaaaagaagcagcgagaaggtatgggt
tctacattttttgatgcaaacttgtatccacaaggttctatggttggtgttcccgagccc
cttcgccctaaacctggtcagttgtccccgtcgcaacaacgtgtctatgaggactttgtt
cggcttccttggcaaagtcactctagccagaattcacattcaatgtccgcaagtgtttct
gttcaatctgctaatagtggtattactggcaccagtgctcctgcttcaggacagataaac
cctggctactctctaaccacaggatacgaggggctctctcgaccaatagatgatatgcca
gaacctaattttactccacatcatagtgcttcctcaattaacattagagcagccgacagt
gtttcccagcatagtatggagaaagactctgttgcctcgtttccttcaactgcttccacc
cctgagttgcacgctgtggattcttcagatgctgggaaagaatctggagcttcttcacaa
ccactggtttcatcaggtgccgtggagcgcattggaagtaacttcttggaatcatctctc
tctacgagggatgctctggataaataccaaattgttgcacaaaagttggaggctctggtc
aacaatgattcgagggaggcagaaatacagggagttatttctgaggtacctgaaatcata
ctcagatgtgttagtcgagatgaagcagctttagctgtggctcaaaaggttttcaagggt
ttatacgacaatgcttcaaatagcgttcatgtctatgcgtaccttgcaatcctgactgcc
attcgtgatgtttgcaagcttgctgtcaaggagcttactagttgggtaatttactcggat
gaagagaggaaatacaacaaagatatcactgttggtctcatccgcagtgaactactaaat
ctaaccgagtataatgttcacatggcaaaacttattgacgggggaagaaacaaggctgct
acggagttttcaatctctcttcttcaaaccctggtcattgaggaaccaaaagttgtttcc
gaacttcacaatcttatcgatgctttggcaaagcttgctacaaagcctggataccccgaa
tcattgcaacaactcattgagatgatcaaaaatcctgttgctttatctgctattaatgct
ggaaaggaggataaatcgaggcaatcaagagacaataagggtcctagtctgctagttgca
aacagggaagagttaaacattgtagattctgccaaacctgatcctgctggattccgtgag
caggtgtccatgttgtttgctgaatggtataggatatgtgaacttcctggtgccaatgat
acatctgctacccacttcatcgtacaattgcatcagagtgggctgcttaagggggatgat
atgacagatcgattttttcgtttgttaatggaaatcgcagttgcacattgcttatccact
gaggggattaattcaggggcaccacaatctcctcaacaaatgctgtcaatgtcatttctc
gcaattgatatttatgcaaagcttgtcttctctatcttgaagggatcaagcaaactcttt
cttctctccaagattctagcggttactgtcagattcattgtaaaagatgcagaggagaag
aaagtctcttttaatccaagaccctatttcagactgttcatcaactggcttctagatctt
ggctcacttgagcctgttactgatggtgcaaatctccagattttgactggttttgccaat
gcatttcatgctctacagccactcaaagttcctggattcagttttgcttggctggagttg
gttagtcacaggagcttcatgccaaaaatgctgactggtaaccttcaaaaaggttggcct
tatatccaaaggttgcttgtagatttgttccaatttatggagccttttctgaggcatgcc
gagctaggagatccggtccgtgttctctacaagggaacacttagggtgctcttggtgcta
cttcatgacttcccagagttcctttgtgactatcactttaccttttgtgatgtgatccct
ccaagttgcatacagatgcgaaatattattctaagtgcatttccgcgtagtatgaggctg
ccagacccttcaactccaaatttgaagattgatttgcttcaagaaataactcaatcccct
cgtattctttctgaggttgatgcagcattgaaagcaaagcagatgaagactgacatagat
gaataccttcagacaagggaacagccttctccacttttatctgaattaaaagagaagctg
ctactctcaccaaatgaagctgcctctgccggcactcgttacaatgtgcctttaatcaac
tcccttgtactgcatgttggaatgcaggcaatcgagcagctcaaggcacgagctccccat
gcacaatcaccacaaactacatatggactggctgtattttctgttggcgctgctttggat
attttccagactttaatcgttgacttggatacagaagggcgctaccttttcctaaatgct
gtcgctaaccaactgcgttatcccaatactcacacacactacttttccttcgtcatcctt
tacttgtttgcagaatcaaaccaggaaattatccaagaacaaattacaagagtcttgctt
gaacgccttattgtaaatcgacctcatccttggggcctcctcattactttcattgagctc
atcaagaatctaaggtataatttctggaaccggtctttcataagatgtgcaccagagatt
gaaaaactttttgaatcagtctcaagatcttgtggaggtccaaaaccagtggaagagagt
atggtttcgggttgggtctga
DBGET
integrated database retrieval system
