Vicia villosa (hairy vetch): 131620870
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Entry
131620870 CDS
T09680
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
131620870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131620870
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
131620870
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
131620870
NCBI-ProteinID:
XP_058748031
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Position
LG7:75925152..75932601
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AA seq
917 aa
AA seq
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MPRRGSSSRREKKPSSEDETKSQHNAGGSLTEISRDAVGKLLRRANKGSTSKKKTTVDFE
PEQNGTRILEPIVPPKTSEVEHCSRDSIGKDSAEEKCGHVSLDEGYADKKEELDDSDWED
GTVAMDDLPMTIELNVTPDSSLKKQIRRASAEDKELAELVHKVHLLCLLARGRLIDRACD
DVLIQASLLSLLPVNLFHLSKGTNLTSKALHPLISWFHDNFHVKNYTNGEKSPHFALASA
IELREGSSEEIAALSVALFRALNLTARFVSILDVSPLKPDQSFRPIASGSSKGIFNTSTP
MVSKQKLDFKSPKKSLSCKREKLCESSLGHSRKSKKRIALSDMDQSKDPSVAEDLNHTVA
NLPTSEAQVNDPESHITDKSHKPKRKGDLEFEMQMEMALSTTAVEYSKSKEESGENIDSS
NFSCPSKRIKRVIGEESSTSPQLISTAVGSMRVGSPLYWAEVYCSEENLTGKWVHIDAVN
LIIDGEDKVEAMVAACKSSLRYVVAFAGQGAKDVTRRYCMRWHKISSQRVNSTWWDSVLA
PLRNLESGATGGVVHSRTSQFTSTEANMNDSFLPTRSSLEDIELETRALTEPLPTNQQAY
KSHPLYAIEKWLTKYQLLHPKGPILGFCSGHPVYPRTCVQTVMTKERWLREGLQVKPNEN
PAKEHKRSIKPQKVQDFEADDHDCTTDSKENIKLYGKWQLEPLNLPHAVDGIVPKNDRGQ
VDVWSEKCLPPGTVHLRFPRAYTVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIVVCAEFK
DTLLEAFAEEDERRKAEERKRDEAQALRRWYQLLSSIVTRQRLNNRYNNNSNSEVANAAH
DMNDNVSNATVCGSSDQNQTPVNHQMDNRGTNLDEPVNISVKDHEHVFLKEYESFDEETF
LLTKRCQCGFSVQVEEL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcagaggaagcagttcacgacgggagaagaagccatcttctgaagatgaaacg
aaatcccaacacaatgccggaggatcattgacggaaatatctcgggatgctgtgggaaaa
cttctacgccgtgctaacaaaggtagcacttccaagaaaaagactacggttgattttgaa
ccagaacaaaatggaactcgaatcttggaaccgattgtcccaccaaaaacttcagaagtt
gaacactgtagtagagattctattggaaaggattctgcagaagagaaatgtggtcatgta
agtttagatgagggatacgcggataaaaaggaagaactggatgattcagattgggaagat
ggtacagttgccatggatgatcttcccatgacaattgaattgaatgtaacccctgattca
tctctaaagaaacaaatacgccgagcttctgctgaagataaggaattggctgaacttgtg
cacaaagttcatttgctttgtttacttgctcggggaagattaatagaccgtgcttgtgat
gatgttttaattcaggcttctctgctttctctacttccagtgaacttgttccacctatca
aaaggcacaaatctcacttcaaaagctctacatcctttaatctcatggttccatgacaat
ttccatgttaaaaactatacaaatggagaaaagtcaccacactttgctttggcatctgct
atagaattacgtgaaggtagttctgaagagattgcagctttatcggtggcactatttaga
gccttaaatcttacagccaggtttgtctccattttggatgtttcacctcttaaaccagat
caatcctttagaccaattgcaagtggatctagtaagggaatatttaatacttcaacacca
atggtatctaagcaaaagttggatttcaagtcacctaaaaaatcactgtcttgtaagaga
gagaaactatgtgaaagctctcttggtcattcacggaaaagtaagaaacgaattgcactg
agcgatatggatcagtctaaagatccatccgttgctgaagatttgaatcatacggtggca
aacctcccaacttctgaggcacaagtcaatgaccctgaatcacatataactgacaaatct
cataaaccaaagaggaaaggggatcttgaatttgagatgcagatggaaatggctctttct
actacagcagttgaatattctaagagtaaagaagagtctggtgaaaatattgattcatca
aatttttcttgtccatctaaaagaataaaaagagttataggtgaagaatcttcaacctct
ccccagctaatttctacagcagttggatcaatgagagtaggatctcctttgtattgggca
gaagtatattgcagtgaagaaaatttgacaggaaaatgggtgcatatcgatgctgtgaat
ttgattattgatggagaagacaaggttgaagctatggttgctgcgtgtaaatcatctttg
agatatgttgttgcttttgctgggcagggggccaaagacgtgacccgcaggtactgtatg
aggtggcataaaatttcatcacaacgagttaattcaacatggtgggattcagtgttggca
ccactgagaaacttagagtctggagcaactggaggtgtggttcattcgagaacaagccaa
ttcacttcaacagaagccaacatgaatgattcttttcttcctacaaggagctctcttgag
gatattgaattagaaaccagggcattaactgagcctcttccaaccaaccagcaggcctac
aaaagtcatccactttatgctatagaaaaatggcttacaaaatatcaactacttcatcca
aagggtccgattttggggttttgttcaggtcacccagtttaccctaggacttgtgtgcaa
actgttatgacaaaagaaagatggctccgggaagggctgcaagtgaaacccaatgaaaac
cctgcaaaggagcataaacgttccattaagcctcagaaagtacaagattttgaagctgat
gaccatgactgcacaactgattctaaggaaaatattaaactttatgggaagtggcaacta
gaaccattaaatcttcctcatgcagtggatggaatagttcctaagaacgatcgcggtcaa
gtagatgtttggtctgagaaatgtctaccaccgggaactgtgcacttgaggtttccaagg
gcttatactgttgccaagaggctagagattgattatgcgcctgctatggttggttttgaa
tttaaaaatggccgatcatatcctgtctatgatggtattgtggtgtgtgctgagttcaag
gatacactgttagaggcattcgcagaagaagatgaacgacggaaagcagaagaaaggaaa
agagatgaagcacaagctcttcgtcgatggtaccagcttctttcatctattgtaactcga
caaaggttaaacaatcgttataataacaattcgaattcagaggtggcaaatgctgcccat
gatatgaatgataatgtgtcaaatgccacagtttgtggtagtagtgaccagaatcagacc
cccgtaaaccatcagatggacaaccgcggtaccaatcttgatgaaccggtaaatatttca
gtaaaagaccatgagcatgtttttttgaaagagtacgaaagctttgatgaggaaactttt
ttactgacaaagcgatgccaatgtgggttttctgttcaagtagaagaattataa
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