Vulpes vulpes (red fox): 112929671
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Entry
112929671 CDS
T05911
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112929671 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvp03019
]
112929671 (CNOT1)
Messenger RNA biogenesis [BR:
vvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112929671 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112929671 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
112929671
NCBI-ProteinID:
XP_025867635
UniProt:
A0A3Q7UJX3
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRSIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSAIGGISSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaaacctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagcttcctgatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtt
ctacatctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacaaatagacgcttttcttaagacgttgcgcagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattccggaggggtagctaaaaccatgatggagagctccttggctgattttatgcag
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcagtataatcatgcaattt
ggtgttcgggaggtcacagctgcccaggttgccagggttttgggaatgatggctcgcacc
cattcaggattgacagatggaattccattacagagtatctctgctcctggtagtgggatc
tggagtgatggaaaagataaaagtgatggagcacaggcacacacatggaatgtagaagtc
ttgattgatgttctcaaggaattgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgatagtaaaggacttcataatgtggtttatggc
attcagaggggtttaggtatggaagtgtttccagtagacctcatatatagaccttggaaa
catgcagaaggccagctctctttcattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatacggttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctgaggctt
gcagaggtggggcaatatgagcaagtcaaacagctcttcagcttccctattaaacactgt
ccagacatgctggtattggccttactacagatcaacacctcttggcacaccttgcgccat
gagctcatctccacactgatgccaattttccttggaaaccatcccaactctgctattatt
ttgcactatgcatggcatggacagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtatgaccaggccaaattgtctcgaata
cttgatgtggcccaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaagcatgtatgactttttta
aagagacgatgcccttccattttgggtggacttgctccagaaaaagatcagcccaaaagt
gctcaacttcccccagaaactctggcaacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttatcagaaaccattctcaccatggtagccaattgcagtaatgtt
atgaacaaggccagacagccaccacctggagttatgccaaaaggacgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaacccca
aatcagacaactgcattcagtgctattggaggaatttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggattgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctattttcagagaatatataatcacccacca
catccaactatgtctgttgatgaggtattagaaatgttacagaggtttaaagattctacc
ataaagagggaacgagaagtctttaactgtatgctgaggaacttatttgaagaatatcga
tttttcccccaataccctgataaagagttacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttacatggcattaggtcttgccctgcgatacgttcttgaa
gccttacgcaagccttttggttccaaaatgtattattttgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatattgagtatggacaacaatccagagat
cctcctgtgaaaatgcagggctctattacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctccccttgctggtcaggttagcacgatggta
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaaccggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagacacgttgcttgtg
gccacagatcaaactgagagaattgtagagcccccagaaaatatccaagagaagattgct
tttatcttcaataatctctcacagtcaaatatgacccaaaaggttgaagaactaaaggaa
actgtgaaggaagaatttatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaacttccacagcctctattcaaacttccttgacacgctgaagaaccctgaa
tttaataagatggttctgaatgagacctacagaaacatcaaagtgctcctgacctctgat
aaagccgcagcaaatttttcagatcgttctttgctgaagaatttgggacactggctagga
atgatcactctagctaaaaataaacccatcttacacactgacttggatgtaaaatctttg
ctgctagaggcttatgtaaaaggacagcaggagttgctctatgtagtgccctttgttgcc
aaagtcttagaatctagcattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagcagagctacatcaggaacatgacttaaagttaaacttgaag
tttgaaattgaggtcctctgtaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcaactctctgctccaaag
aaagatgtcaagcagccagaagaactccctcccatcacaaccacaacaacttctacaaca
ccagctaccagtaccacttgtacagccacggttccaccacaacctcaatacagctaccac
gacatcaatgtctattcccttgcaggcctggcaccacacattaccctaaatccaacaatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgccaggcaattgaacgggct
gtccaggagctggtccatcctgtggttgatcgatcaattaagattgccatgactacttgt
gagcaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaatttaacagctggaatggctatgattacctgcagggaacct
ttgctaatgagcatatctaccaacctgaaaaacagttttgcctcagccctacgtactgca
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagagaaagcgggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacacgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaggagtttgcacgcaatgtgcct
ggcttcttgcccacaaatgatttaagtcagcccacgggatttttagctcaacccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgcattacagaattggag
cagcacctgcatgccatcccaccaactttggccatgaatcctcaagcccaggctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggtttattagatgccacaagtggtgctgatgctgaccta
ttgctgcgctatagggagtgccaccttttggtgttaaaagctcttcaagatggccgggca
tatgggtctccgtggtgtaacaaacagatcacaaggtgcctaattgaatgtcgagatgag
tataaatataatgtggaagcagtggagttgctcattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaattacatggccgtggca
tttgctatgcaattggtaaaaatcctattggtggatgaaaggagtgttgctcatgttact
gaggcagatctattccacaccattgaaactctcatgaggattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctggaatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaagactgatgac
ctcataacaaggttctttcgtctatgtactgaaatgtgtgttgaaatcagttaccgtgct
caggcagagcagcagcacaatcctgctgctaatcctaccatgatccgagccaagtgttat
cacaacctggatgcttttgtccgactcattgcactgctagtgaagcactcaggggaagcc
accaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctcctgcaggaccatgatgttcggcagagtgaatttcagcagcttccctaccatcgaatt
tttatcatgctgctcttagaactcaatgcacctgagcatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacattccacatcttgaggcctaccaaagctcctggc
tttgtgtatgcctggcttgaactgatctcccaccggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcccagctactgatagatttgttcaaa
tatttggctcctttccttagaaatgtggaactcaccaaacctatgcaaatcctctataag
ggcactttgagggtgctgctggttcttttgcatgatttccctgagttcctttgtgattac
cattatggattttgtgatgtgatcccacctaattgtattcagctaagaaatctcatcctg
agtgccttcccaagaaacatgaggctcccggacccattcactcctaatctgaaggtggat
atgttgagtgaaattaacattgcaccccggattcttaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcttatcttaaaactcgatcaccggtcacttttctg
tctgatttgcgaagcaacctacaggtatccaatgagcctggcaatcgttacaacctccag
ctcatcaatgcactggtgctctatgtagggactcaggccattgcgcatatccacaacaag
ggtagcacgccatcaatgagcacgatcacccactcggctcacatggacatcttccagaac
ctggctgtggacttggacactgaaggtcggtatctcttcctgaatgccattgcaaatcaa
ctgcggtacccaaatagccacactcactacttcagctgtaccatgctgtacctttttgca
gaagccaacactgaagctattcaagaacagattacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtcttcttattaccttcattgagctgattaaaaatcca
gcgtttaagttctggaaccatgagtttgtacactgtgccccagaaattgaaaagttattc
caatcggttgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggaca
ggtgccagttag
DBGET
integrated database retrieval system
