Weissella tructae WS08: WS08_0138
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Entry
WS08_0138 CDS
T03228
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
wce
Weissella tructae WS08
Pathway
wce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS08_0138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wce03019
]
WS08_0138
Messenger RNA biogenesis [BR:
wce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WS08_0138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_PNO1_2nd
ATP-synt_B
KH_2
KH_NusA_2nd
Propep_M14
VTT_dom
KH-I_KHDC4-BBP
DUF3139
UPF0154
YtxH
Motif
Other DBs
NCBI-ProteinID:
AIG65077
UniProt:
A0ABM5QQ65
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Position
179924..181489
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AA seq
521 aa
AA seq
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MENLLMFILVSFAAIVIGGFLGYFFANKAINKRLSDAHRNATDITNQATVEATQLKKSAL
VEARDESQRYQDRIESELQERRSEVKVQEERLVSRESVLDRKDASLQKREEGVVDKEKIL
DQQRQSVSDKLKHADALVDARETKLSEIANLDQEEARERVLAETKDALAAERAVMIKESN
AQANAESEKRAKELIVGAIQRSAADMVAETTVSVVNLPNDDMKGRIIGREGRNIRALETV
TGIDVIIDDTPEAVVLSGYDPIRREIAKNTLDKLISDGRIHPARIEETVEKSRKEMDEHI
REVGEQAVFDLGIHNMHPDLIKTIGRLNYRTSYGQNVLVHSIEVAKLSGLLAAELGEDVT
QAKRAGLLHDIGKAIDHDVDGSHVELGVELATKYSERPEIINAIASHHNDVEPEFVVSEL
VAAADSISAARPGARSESLENYVQRLKQLETIANGFSGVDKSFAIQAGREVRVVVEPAAV
SDLEATVLAHDIKTQIETELDYPGHIKVTVIRESRSIEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttactcatgtttatccttgtttcgtttgccgcaatcgtaatcggtggtttt
ctgggttatttttttgcgaataaagcaattaataagcgactttcagatgcccatagaaat
gcaacagatatcacgaatcaagcaactgtcgaagcgacacaattaaaaaagtctgctttg
gtggaagctcgagatgaaagccaacgttaccaagaccgtattgaatctgaactacaagaa
cgtcgttcagaagtaaaagtacaagaagaacgacttgttagtcgtgaatctgtattagat
cgtaaagatgcttcgttgcaaaagcgcgaagaaggagttgttgataaggaaaagattctg
gatcaacaacgtcaaagtgtctcagataagttgaagcatgcagatgctttggttgatgca
cgagaaacaaagttaagtgaaattgccaatcttgatcaagaagaagcacgtgaacgcgtg
ttagctgaaacgaaggatgctttagcagccgaacgtgcagtcatgattaaggaaagcaat
gcccaagccaatgctgaatcagaaaagcgtgccaaggaattaatcgttggtgccattcaa
cgttctgcagcggacatggtagctgaaacaactgtttcagttgttaatttgcctaatgat
gatatgaagggacgaattattggtcgtgaaggacgtaatattcgtgccttggagacagta
actggaattgacgttattatcgacgatacaccagaagcggttgtattgagtggttatgac
ccaattcgtcgtgaaatcgccaagaatacattggacaagttgatttccgatggacgtatt
cacccagctcgtattgaagaaactgttgaaaagtctcgtaaagagatggacgaacatatt
cgtgaagttggggaacaagctgtctttgatctagggattcataacatgcatcctgatttg
attaagacaattggacgtttgaactaccgtacaagttatggtcaaaatgtcctagttcat
tcaatcgaagttgcgaagctatcaggtttgttagctgcggaacttggagaagatgttaca
caagccaagcgtgctggtttgttacatgacattggtaaggcgattgaccatgatgttgat
ggatcacacgttgaattgggtgttgaattggcaaccaagtacagcgaacgtccagaaatc
attaacgcaattgcgtctcaccataatgatgtagaaccagaattcgttgtatcagaatta
gtagcagccgcagattcaatctcagctgctcgtccaggggctcgttcagaatctttggaa
aactatgtacaacgcttgaagcaattggaaacaattgccaacggatttagtggtgttgat
aagtcatttgctatccaagctggtcgtgaagtacgtgttgttgttgaaccagcagccgtg
tctgatctagaggctactgttttggcacatgatattaaaacacaaattgaaacagagtta
gattacccaggtcacattaaggtgacggttattcgtgaatctcgttcaattgaatacgcg
aaataa
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