KEGG   Weissella tructae WS08: WS08_0138
Entry
WS08_0138         CDS       T03228                                 
Name
(GenBank) Ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
wce  Weissella tructae WS08
Pathway
wce03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:wce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WS08_0138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wce03019]
    WS08_0138
Messenger RNA biogenesis [BR:wce03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     WS08_0138
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_PNO1_2nd ATP-synt_B KH_2 KH_NusA_2nd Propep_M14 VTT_dom KH-I_KHDC4-BBP DUF3139 UPF0154 YtxH
Other DBs
NCBI-ProteinID: AIG65077
UniProt: A0ABM5QQ65
LinkDB
Position
179924..181489
AA seq 521 aa
MENLLMFILVSFAAIVIGGFLGYFFANKAINKRLSDAHRNATDITNQATVEATQLKKSAL
VEARDESQRYQDRIESELQERRSEVKVQEERLVSRESVLDRKDASLQKREEGVVDKEKIL
DQQRQSVSDKLKHADALVDARETKLSEIANLDQEEARERVLAETKDALAAERAVMIKESN
AQANAESEKRAKELIVGAIQRSAADMVAETTVSVVNLPNDDMKGRIIGREGRNIRALETV
TGIDVIIDDTPEAVVLSGYDPIRREIAKNTLDKLISDGRIHPARIEETVEKSRKEMDEHI
REVGEQAVFDLGIHNMHPDLIKTIGRLNYRTSYGQNVLVHSIEVAKLSGLLAAELGEDVT
QAKRAGLLHDIGKAIDHDVDGSHVELGVELATKYSERPEIINAIASHHNDVEPEFVVSEL
VAAADSISAARPGARSESLENYVQRLKQLETIANGFSGVDKSFAIQAGREVRVVVEPAAV
SDLEATVLAHDIKTQIETELDYPGHIKVTVIRESRSIEYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggagaacttactcatgtttatccttgtttcgtttgccgcaatcgtaatcggtggtttt
ctgggttatttttttgcgaataaagcaattaataagcgactttcagatgcccatagaaat
gcaacagatatcacgaatcaagcaactgtcgaagcgacacaattaaaaaagtctgctttg
gtggaagctcgagatgaaagccaacgttaccaagaccgtattgaatctgaactacaagaa
cgtcgttcagaagtaaaagtacaagaagaacgacttgttagtcgtgaatctgtattagat
cgtaaagatgcttcgttgcaaaagcgcgaagaaggagttgttgataaggaaaagattctg
gatcaacaacgtcaaagtgtctcagataagttgaagcatgcagatgctttggttgatgca
cgagaaacaaagttaagtgaaattgccaatcttgatcaagaagaagcacgtgaacgcgtg
ttagctgaaacgaaggatgctttagcagccgaacgtgcagtcatgattaaggaaagcaat
gcccaagccaatgctgaatcagaaaagcgtgccaaggaattaatcgttggtgccattcaa
cgttctgcagcggacatggtagctgaaacaactgtttcagttgttaatttgcctaatgat
gatatgaagggacgaattattggtcgtgaaggacgtaatattcgtgccttggagacagta
actggaattgacgttattatcgacgatacaccagaagcggttgtattgagtggttatgac
ccaattcgtcgtgaaatcgccaagaatacattggacaagttgatttccgatggacgtatt
cacccagctcgtattgaagaaactgttgaaaagtctcgtaaagagatggacgaacatatt
cgtgaagttggggaacaagctgtctttgatctagggattcataacatgcatcctgatttg
attaagacaattggacgtttgaactaccgtacaagttatggtcaaaatgtcctagttcat
tcaatcgaagttgcgaagctatcaggtttgttagctgcggaacttggagaagatgttaca
caagccaagcgtgctggtttgttacatgacattggtaaggcgattgaccatgatgttgat
ggatcacacgttgaattgggtgttgaattggcaaccaagtacagcgaacgtccagaaatc
attaacgcaattgcgtctcaccataatgatgtagaaccagaattcgttgtatcagaatta
gtagcagccgcagattcaatctcagctgctcgtccaggggctcgttcagaatctttggaa
aactatgtacaacgcttgaagcaattggaaacaattgccaacggatttagtggtgttgat
aagtcatttgctatccaagctggtcgtgaagtacgtgttgttgttgaaccagcagccgtg
tctgatctagaggctactgttttggcacatgatattaaaacacaaattgaaacagagtta
gattacccaggtcacattaaggtgacggttattcgtgaatctcgttcaattgaatacgcg
aaataa

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