Waddlia chondrophila: wcw_1785
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Entry
wcw_1785 CDS
T01255
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
wch
Waddlia chondrophila
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wch03016
]
wcw_1785 (trmE)
Transfer RNA biogenesis [BR:
wch03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
wcw_1785 (trmE)
Prokaryotic type
Methyltransferases
wcw_1785 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
GTP_EFTU
Dynamin_N
MMR_HSR1_Xtn
GCV_T
RsgA_GTPase
Gtr1_RagA
Roc
Ras
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADI39124
UniProt:
D6YSS9
LinkDB
All DBs
Position
1902163..1903521
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AA seq
452 aa
AA seq
DB search
MKFTLDHTIAAIATPPGEGGVAVIRISGKESIPIANAIFSGSIDSMKSHTVRYGHIRCQG
EHIDDVLLLVMRAPRSYTGEDTVEIHCHGGSLITRRVLDTVLAAGAKQALPGEFTFRAFI
HNKLDLSQAEAVQELIGAKNERALDASKQQLQGRLSDKILSFQSQLNSIAAILEAWVDFP
DEGLEFASFEEVCSDLESVIGEMKELKSTYHDGKILHDGISLCLIGRPNVGKSSLMNALL
DKERAIVTDTPGTTRDIVEDSLRINGLNFRLIDTAGIREGAETIEQEGIRRSKEALEKAD
LVLLVLDAKRGVTAEDEQLIDLVPKGKTIAVWNKIDLPHDEAPQLGIPYIVPISAKEKKG
LKQLHEQIDRVVWEHGPPSKEEILITNVRHKESLSDAIAACEKVLEGLRSDISPEFVAFD
MRDCLENLGKVIGTDVTEDILSAIFSKFCVGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacattggaccatacaatcgcagccatcgccactcctcccggcgaaggagga
gtcgcggttatccgcatctcaggcaaggagtcgattccaatcgccaacgccatcttttcc
ggcagcatcgatagcatgaaaagccacacagtgcggtacggccatatccgttgtcaaggg
gaacatatcgatgacgtcctcctgcttgtcatgcgtgctccccgctcatacactggagaa
gacacggtcgaaatccactgccacggcggaagcctgatcacacgcagagtcttggacacg
gtgcttgcagcgggagccaagcaagcgcttccaggggaatttacgttccgtgctttcatt
cacaataaactcgatctctctcaagcagaagctgtgcaggaactgatcggagcaaaaaac
gaacgggcactggacgcaagtaaacagcaattgcaaggacgcctttcagataaaatcctc
tctttccagtcccaattaaacagcattgcagcgattttggaagcatgggtggattttccg
gatgaaggattggagtttgccagctttgaagaggtgtgcagcgatctggaatccgtgatt
ggggaaatgaaggagcttaagtccacttatcacgatggtaaaattctgcacgacggcatt
tcactttgcctgatcggccgccctaacgtgggaaaatcgtcgctcatgaatgcactttta
gataaagagcgggcgatcgttaccgacacaccgggaacaacacgcgatatcgtcgaagat
tcattaagaatcaatgggttgaatttccgcctgatcgatacggcaggaattagagaaggt
gccgaaacgattgagcaggaagggattcgccgctccaaagaggccttggaaaaagctgat
cttgttttgctcgtgctggacgctaaaagaggagtcactgcagaagatgaacagttaatc
gacctcgtccctaaaggaaaaacgatagcggtttggaacaaaatcgatcttcctcatgat
gaagcgccgcagctgggaattccttatattgtcccgatttccgctaaagagaaaaagggg
ctaaagcagctgcatgagcagatcgaccgcgttgtctgggaacatggccctccttcaaaa
gaagagatcttgatcacgaatgtcaggcataaggaatcgctctctgatgcgatcgctgcg
tgtgaaaaagtgcttgagggcttacgttcagacatttctccggaatttgttgccttcgat
atgcgcgattgtctggaaaacttaggaaaagtgatcggtacggatgtaactgaggatatt
ctatcagccattttttcaaaattttgtgttggtaaatga
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