Wolbachia endosymbiont of Folsomia candida: ASM33_03790
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Entry
ASM33_03790 CDS
T05726
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
weo
Wolbachia endosymbiont of Folsomia candida
Pathway
weo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
weo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASM33_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
weo03400
]
ASM33_03790
DNA repair and recombination proteins [BR:
weo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASM33_03790
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASM33_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
UB2H
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
APR98383
UniProt:
A0A218KNW7
LinkDB
All DBs
Position
complement(1471796..1473727)
Genome browser
AA seq
643 aa
AA seq
DB search
MEFQLTTHFQPAGDQPQAIDNLVAGLSNNKRDQVLLGVTGSGKTFTMANVIERTGRPALI
MAHNKTLAAQLYEEMRGFFPNNAVEYFISYYDYYQPEAYLPQTDTYIEKDSAINERIDML
RYSTVCSLLERRDTIVVASVSCIYGLGSPESYLSMTIPLSVGNKIRVNDFLGNLTDLQYK
RSDTRFERGYFRVRGDIIDIFPSHSETKAWRLSLFGDEIEEIFEVDAITGNVIKSVNKIT
IFPNSHYVTPRNTLLQAVDLIKKELNERLDYYYSDGKIVEAKRLEQRTNFDIEMMRATGT
CKSIENYSRYLYGMEAGDPPPTLFEYLPKDVILFVDESHVTVPQVGAMHSGNQVRKEKLI
NYGFRLPSAFDNRPLKFEEWEEMRPQTIYVSATPGKYELAKVENICIEQVIRPTGLTDPI
CIIKPVETQVDDVIHEAQVTIKKGFCVLITTLTKKMAENLSEYMNELNIRVSYLHSDIGA
LERIDIICKLRSKEIDVLVGVNLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRA
ARNAEGRVILYADKMTGSLERALKETERRRKKQEEYNVLHNITPRTITKAISNTLQEKAM
KEPGMNADGSKKELQKKMLEHADNLEFEEAAKIKLLIEKLNDV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcaactcactacacattttcagccagctggtgatcaaccacaagcaatcgat
aatctagttgcagggctgagcaacaataaaagagatcaagttttacttggagttactggt
tctggaaaaactttcactatggcaaatgttatagaaagaactggcagacctgctttaatt
atggcacacaataaaaccttagcagcacagctttatgaggaaatgagaggattttttcca
aataatgccgtggaatatttcatttcatattatgattactatcagccagaagcttattta
ccacaaactgatacttacattgaaaaagactctgcaatcaatgaaagaattgatatgctt
cgttattccacagtttgctctcttttagagcgcagggatacaatagttgttgcaagtgta
tcttgcatatacggtcttggttcgcctgaaagctatctcagcatgactatacctcttagt
gtagggaataagattcgtgttaatgatttcttgggtaatttaactgacctgcaatataaa
cgctctgacaccaggtttgaaagagggtatttcagagtgcgtggtgatattattgatata
tttccctcacactctgaaactaaagcttggcgtttatcattgtttggcgatgaaatagaa
gaaatttttgaagttgatgctattactggcaacgttatcaaaagcgtaaataaaatcacc
atttttccaaacagccattacgtaacgccgcgtaatacactgctgcaagcggttgatttg
atcaaaaaagagttaaatgaacgtctggattattattattcagatggcaaaattgttgaa
gcaaagcgcctagagcaacgcactaattttgatattgaaatgatgagagcaacaggaaca
tgtaaaagcattgaaaattattcacgatatctatatggaatggaagcaggagatccaccg
cctactttatttgaatatttaccaaaagatgtgattttatttgttgatgaaagtcacgtc
actgttcctcaagtaggtgcaatgcacagtggcaatcaagtacgtaaagagaaattaatt
aactacggctttaggcttccttccgcttttgataatcgtccactaaaatttgaagagtgg
gaggaaatgcgtccacaaaccatttacgtttcagccactcctggaaagtatgaactggca
aaggtcgagaatatttgtatagagcaagttatccgtcctacagggcttacagacccaatc
tgcattataaaaccagtagagactcaagttgatgatgtcattcatgaagcacaagtcaca
ataaagaaaggattttgtgttctaattaccacattgacaaaaaaaatggctgaaaattta
tctgagtatatgaatgaactgaatattagagtcagttatttacactcagatatcggtgca
ctagaaagaatagatatcatctgcaaattaaggtctaaagagatcgatgtactagtaggt
gtgaatttattgagggaaggtcttgatattcctgagtgtggtctggttgcaattttggat
gctgataaagaaggatttttgagatcggaaacctcattaattcaaacgattggacgcgct
gcacgtaatgctgagggtagagtgattttatacgcggataaaatgactggttctttggaa
cgtgcactcaaagagactgaaagaagaagaaagaaacaggaagaatataatgtattgcat
aatattacgccgaggactataacaaaggctatatcgaataccttgcaagagaaagcaatg
aaagagccaggaatgaatgcagatggaagcaaaaaagagctacagaagaaaatgctggag
catgctgacaatttagagtttgaggaggcagcaaagatcaaattgcttattgaaaaatta
aatgatgtatga
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