Wolbachia endosymbiont of Wiebesia pumilae: HUB92_02785
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Entry
HUB92_02785 CDS
T07687
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wew
Wolbachia endosymbiont of Wiebesia pumilae
Pathway
wew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUB92_02785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wew03019
]
HUB92_02785
03009 Ribosome biogenesis [BR:
wew03009
]
HUB92_02785
Enzymes [BR:
wew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
HUB92_02785
Messenger RNA biogenesis [BR:
wew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUB92_02785
Ribosome biogenesis [BR:
wew03009
]
Prokaryotic type
rRNA processing factors
HUB92_02785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
TdIF1_2nd
Motif
Other DBs
NCBI-ProteinID:
QTP61848
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Position
529432..531195
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AA seq
587 aa
AA seq
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MTNSGKRVLLIENSICSNEVRVALSINNKVVEFEQEFKEKKQLRGNIYVAYIKRIEPSLQ
AVFIEYGKNKQGFLSFSEISLDYFNIPEKEKETIFEGYSNDDCIEEASANVSSDSAASKN
VNGSGSGFVREVPLYKKYKLQDVISVNQKVLVQLTKEERGNKGASFTTYITLVGRYCVFM
PNSMSKGGVSRRIEDANVRKQLKEILSSINLPKRSGLIVRTVGSGKNKKEIEQDYNYLSS
LWQSIQKNAFSVNVPSLIYNEADVIMRSVRDFCSDGIEVIVSGKEAFEAVRQYANNALKG
SKLRYRLYRGYAPIFTYYGIEDQISELYSNRVELPSGGSLIITLTEAFVSIDVNSGKMTG
EDSIEETAYRTNMEAVPEISRQVNLRGLSGLIVVDFIDMLKYQYCRAVESAIKQAFKDDK
AKVQFSYINDFGLMVFSRQRIKPNIQEINTTECLHCKGTGRVKSNEVIVSSILRDLQHIA
NKNRNKSFDLVAHSAVIAHIFNNKRNTVSTIEKEFNITLNVSIDNSLDVNTFVLKQGDDV
NLNGYKPLQNSGYQIGDSSNEEADNSNKLRGNFWLTKWLSRLLSSNN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaatagtggtaaaagggtattattgatagaaaattctatctgttctaatgaggta
agagttgccttgtcaattaataacaaggttgtagaatttgaacaagaattcaaggaaaaa
aaacaattaagaggtaatatatacgttgcttatataaagcgtatagagccttctttgcaa
gccgtatttattgaatatgggaaaaataagcaaggttttttgtctttttccgagatatct
ctagattacttcaacattccagaaaaagaaaaggaaactatctttgagggctactcaaat
gacgattgtatagaagaagcctcagcaaatgtttcttcagattctgcagctagtaagaat
gtcaacggatcaggtagtggttttgtaagagaggtacctttatataaaaaatacaaatta
caagatgttatttcagtaaatcaaaaagtattggtccagctaactaaagaggaacgaggc
aataaaggagcttcatttacaacatacataactttagtgggtagatactgtgttttcatg
ccaaattccatgagcaaaggtggagtgtcccgcagaattgaagatgctaatgtcagaaag
cagttaaaggagatactgagttcaataaacttgccaaaaagatcaggtttaatagtaaga
actgttggttcaggaaaaaataagaaagaaattgagcaggattacaattacttatcctca
ttatggcagagcattcaaaaaaatgccttctctgtaaacgttccatcattaatttacaat
gaagcagatgtaattatgagatctgttcgtgatttttgtagcgatggtatagaagttata
gtgtctggaaaggaagcttttgaggcagttaggcaatatgctaacaatgcactaaaaggt
agtaagttgcgctatagattgtatagaggttatgctccgatctttacttactacggaatc
gaagatcaaatttctgagttatatagcaatagagtagaattgccatctggtgggtctttg
ataataactttaactgaggcgtttgtttcaatagacgtaaattcaggaaagatgacagga
gaagatagcatagaagaaacagcttatagaaccaacatggaagcagtacctgaaatatca
agacaggtgaatcttaggggcctatcaggattaatagtagtcgattttattgatatgttg
aaatatcagtattgcagagctgttgagtctgctataaagcaagcgtttaaagatgataaa
gctaaagttcaatttagctacataaatgactttggtttaatggtattttcaagacaaaga
attaaaccaaacatacaagaaattaatactacagagtgtttacactgcaaaggtactgga
agagtaaaatcaaacgaagtaattgtttcatcaatactaagggatttacaacatattgct
aacaagaatcgaaataagtcttttgatttagtagcacacagtgcagttatagcgcacatt
tttaataacaaacgcaatacagtttctacaatcgaaaaagagtttaatattacattgaac
gttagtattgataacagtttagatgtaaatacatttgttttaaaacaaggagatgatgtt
aatttaaacggttataagccattacagaactctggataccaaattggggatagcagcaat
gaagaagctgataattcaaataaactacgaggcaatttttggctgactaagtggctttcg
cgccttttaagttctaataactaa
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