Weissella hellenica: EFA59_03955
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Entry
EFA59_03955 CDS
T06311
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
whe
Weissella hellenica
Pathway
whe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
whe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFA59_03955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
whe03019
]
EFA59_03955
03400 DNA repair and recombination proteins [BR:
whe03400
]
EFA59_03955
Enzymes [BR:
whe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFA59_03955
Messenger RNA biogenesis [BR:
whe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFA59_03955
DNA repair and recombination proteins [BR:
whe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EFA59_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
SMC_N
AAA_22
DUF6405
Motif
Other DBs
NCBI-ProteinID:
QDJ58724
LinkDB
All DBs
Position
818503..819945
Genome browser
AA seq
480 aa
AA seq
DB search
MTQINLKQVLQKQFGFENFKTGQEEILTALMAQQSTLAVLPTGGGKTLIYQMMGALRPGL
VVIVTPLLSLMQDQVARLNYLGEKQVVALNSNLTFQEKQSILNNLARYHFIFVSPETLNQ
EAVKIALQRTMINLMVIDEAHTMVTWGQDFRPDYLALPQIHIQLNEPQLLLLTATATPNM
MQEIVASFNPTAKNWFIYQQPVDRPNIFLHNEQLANEAIKKQRLKTLVQTTQGPGIVYFT
SRKLATSMAEWLSDETGLNVVAYHAGMDAISRYRVQQQFMQGDIDVITATSAFGMGIDKE
DVRFVIHYHLSNDLANYLQEIGRAGRDGKQSVAILLYVVGDESIQFNLIDQSIPSESIVK
AYLDRDEKTQITEEQIKLLTEYRHQGLSTTSIVELFANRKKMRQNKLQHMIDYAQAKTQL
RNSISQYFGNDTQHLSQDTESVGVTAWQPEQLNLARQEINGHITKVSEWSQQLKKLFNLQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaattaatttaaaacaagttttgcaaaaacagtttggctttgaaaattttaaa
actggtcaagaagaaatcttaacggctttgatggcacaacaatcaacattggcagtttta
ccaacaggtggtggtaaaacgttaatttatcaaatgatgggtgcactacgtccaggatta
gttgtgattgtgacccctttattatcgctaatgcaagatcaagttgctcgtttaaattat
ttaggggagaagcaagttgtagcgctaaattctaatttaacatttcaagagaaacagtct
attttaaacaatttagcacgctaccattttatctttgtttcaccagaaacactgaatcaa
gaggctgtgaaaatagctttacaacggaccatgattaatttaatggtaattgatgaggcg
catacaatggtgacctggggccaagattttcggcctgattatctagcgttaccacaaatt
catatacaattaaatgaaccgcaattattgttattaacggcaactgcgacgcccaatatg
atgcaagaaatcgtagccagttttaatccaacagccaaaaattggtttatctatcaacaa
ccagttgatcgacctaatatttttttacacaatgaacaattagctaacgaagcaataaaa
aagcaacggttaaaaactttggttcaaacaacccaaggaccaggaattgtttattttaca
tctagaaaattagcaacaagtatggcggaatggttgtcagatgagactggcttaaatgtg
gtggcttaccatgctggaatggacgcaatttcccgttatcgtgtgcaacaacaattcatg
caaggggatattgatgttattacagctacgtcagcatttggtatgggaattgataaagaa
gatgttcgttttgttattcattatcatttgagcaatgatttagcgaattatttgcaagaa
attggccgtgctggtcgtgatggtaaacaatctgtggccattttattatatgttgtaggt
gatgaatcgatccaatttaacttgattgaccagtcaatcccgagtgaatctatcgtcaaa
gcttacttggatcgggatgaaaaaacgcaaataacagaagaacagattaaattactgaca
gaatatcgtcaccaaggtttgtcgacgactagtattgttgaattattcgccaatcgcaaa
aaaatgcgacaaaataaattgcagcatatgatagattatgcgcaagcaaaaacacagtta
cgtaacagtattagtcaatattttggcaatgatacgcagcacttgtcacaagatacagaa
agtgtgggtgtgacagcgtggcagccagaacaactaaatttagcacgtcaagaaataaat
ggccatataacaaaggtgtcagagtggtcgcaacagttgaaaaaactatttaatttacag
taa
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