Wallemia ichthyophaga: J056_003243
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Entry
J056_003243 CDS
T03457
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
wic
Wallemia ichthyophaga
Pathway
wic03022
Basal transcription factors
wic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J056_003243
09124 Replication and repair
03420 Nucleotide excision repair
J056_003243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_003243
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_003243
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
J056_003243
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
J056_003243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
20376195
NCBI-ProteinID:
XP_009270495
UniProt:
R9A973
LinkDB
All DBs
Position
Unknown
AA seq
66 aa
AA seq
DB search
MVKASKGILISCDPAVKQIILNLNDRKRFIIQDLDLQHILVSPDSVQTIKFEVEKELERN
TFQILD
NT seq
201 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaagccagcaaaggaattcttattagttgcgatcccgccgtgaagcagattatc
ctcaatctcaacgacaggaagagattcattatccaggatttagatctccagcacatcctc
gtcagccctgacagcgtacagactattaaatttgaagttgagaaggagcttgagcgcaat
accttccagatattagattga
DBGET
integrated database retrieval system
